RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SLC4A4Q9Y6R1 1079 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 A0A0G2JMZ2 1700 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 PLXNB2O15031 1838 aa18.89■□□□□ 0.61
HDAC4-213ENST00000496347 CYP2D6P10635 497 aa18.89■□□□□ 0.61
HDAC4-213ENST00000496347 VCAM1P19320 739 aa18.89■□□□□ 0.61
HDAC4-213ENST00000496347 EVX2Q03828 476 aa18.89■□□□□ 0.61
HDAC4-213ENST00000496347 C12orf60Q5U649 245 aa18.89■□□□□ 0.61
HDAC4-213ENST00000496347 ROBO3Q96MS0 1386 aa18.89■□□□□ 0.61
HDAC4-213ENST00000496347 RNF113AO15541 343 aaKnown RBP18.88■□□□□ 0.61
HDAC4-213ENST00000496347 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 FLT3LGP49771 235 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 GIMAP6Q6P9H5 292 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 C16orf86Q6ZW13 317 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 SLC44A5Q8NCS7 719 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 PXYLP1Q8TE99 480 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 STRBPQ96SI9 672 aaKnown RBP18.88■□□□□ 0.61
HDAC4-213ENST00000496347 GABRQQ9UN88 632 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 SALL3Q9BXA9 1300 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 PARP14Q460N5 1801 aa18.88■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L12C9JPN9 530 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L21D6R901 530 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 MPHOSPH10O00566 681 aaKnown RBP18.87■□□□□ 0.61
HDAC4-213ENST00000496347 CEP290O15078 2479 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 GNAT2P19087 354 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 UBXN2AP68543 259 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 SEPT2Q15019 361 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 ZYXQ15942 572 aaKnown RBP18.87■□□□□ 0.61
HDAC4-213ENST00000496347 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 ACER1Q8TDN7 264 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
HDAC4-213ENST00000496347 CCDC17Q96LX7 622 aa18.87■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L13C9JLJ4 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L11C9JVI0 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L18D6R9N7 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L22D6RA61 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L17D6RBQ6 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L19D6RCP7 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L20D6RJB6 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 GPAA1O43292 621 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 ADCY3O60266 1144 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 USP17L24Q0WX57 530 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 SOCS4Q8WXH5 440 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 OSBP2Q969R2 916 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 DYNLL2Q96FJ2 89 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 P2RX7Q99572 595 aaKnown RBP18.86■□□□□ 0.61
HDAC4-213ENST00000496347 SH2D4AQ9H788 454 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 RLFQ13129 1914 aa18.86■□□□□ 0.61
HDAC4-213ENST00000496347 EN2P19622 333 aaPredicted RBP18.85■□□□□ 0.61
HDAC4-213ENST00000496347 ICA1Q05084 483 aa18.85■□□□□ 0.61
HDAC4-213ENST00000496347 CTR9Q6PD62 1173 aa18.85■□□□□ 0.61
HDAC4-213ENST00000496347 LBX2Q6XYB7 198 aa18.85■□□□□ 0.61
HDAC4-213ENST00000496347 NKX2-3Q8TAU0 364 aa18.85■□□□□ 0.61
HDAC4-213ENST00000496347 LPAR1Q92633 364 aa18.85■□□□□ 0.61
HDAC4-213ENST00000496347 FSD1Q9BTV5 496 aa18.85■□□□□ 0.61
HDAC4-213ENST00000496347 TXNRD2Q9NNW7 524 aa18.85■□□□□ 0.61
HDAC4-213ENST00000496347 ZNF236Q9UL36 1845 aa18.84■□□□□ 0.61
HDAC4-213ENST00000496347 CYP2D7A0A087X1C5 515 aa18.84■□□□□ 0.61
HDAC4-213ENST00000496347 MYCP01106 439 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-213ENST00000496347 MAPK4P31152 587 aa18.84■□□□□ 0.61
HDAC4-213ENST00000496347 CDK8P49336 464 aa18.84■□□□□ 0.61
HDAC4-213ENST00000496347 ERVK-9P63128 1117 aa18.84■□□□□ 0.61
HDAC4-213ENST00000496347 ERVK-24P63145 666 aa18.84■□□□□ 0.61
HDAC4-213ENST00000496347 SBK1Q52WX2 424 aa18.84■□□□□ 0.61
HDAC4-213ENST00000496347 PRPF38BQ5VTL8 546 aaKnown RBP18.84■□□□□ 0.61
HDAC4-213ENST00000496347 ARHGEF10LQ9HCE6 1279 aa18.84■□□□□ 0.61
HDAC4-213ENST00000496347 BIN2Q9UBW5 565 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-213ENST00000496347 GSG1L2A8MUP6 293 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 INHAP05111 366 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 CCL5P13501 91 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 AKR1B1P15121 316 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 MTFR1Q15390 333 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 ANKRD45Q5TZF3 282 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 CATSPERGQ6ZRH7 1159 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 RPAP3Q9H6T3 665 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-213ENST00000496347 RBPJLQ9UBG7 517 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 STAP2Q9UGK3 403 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 RABGAP1Q9Y3P9 1069 aa18.83■□□□□ 0.6
HDAC4-213ENST00000496347 A0A1W2PRG0 241 aa18.82■□□□□ 0.6
HDAC4-213ENST00000496347 M0R2C6 588 aa18.82■□□□□ 0.6
HDAC4-213ENST00000496347 HMGCRP04035 888 aa18.82■□□□□ 0.6
HDAC4-213ENST00000496347 GJB1P08034 283 aa18.82■□□□□ 0.6
HDAC4-213ENST00000496347 ELNP15502 786 aa18.82■□□□□ 0.6
HDAC4-213ENST00000496347 CCNA1P78396 465 aa18.82■□□□□ 0.6
HDAC4-213ENST00000496347 PAGR1Q9BTK6 254 aa18.82■□□□□ 0.6
HDAC4-213ENST00000496347 EPB41L4AQ9HCS5 686 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-213ENST00000496347 MYH4Q9Y623 1939 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 SPDYE16A6NNV3 312 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-213ENST00000496347 GJA8P48165 433 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 TDO2P48775 406 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 SHISA4Q96DD7 197 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 NACAP1Q9BZK3 213 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 RNF208Q9H0X6 261 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 RWDD1Q9H446 243 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-213ENST00000496347 KANSL2Q9H9L4 492 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 GJD2Q9UKL4 321 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 TMX2Q9Y320 296 aa18.81■□□□□ 0.6
HDAC4-213ENST00000496347 SMIM22K7EJ46 135 aa18.8■□□□□ 0.6
HDAC4-213ENST00000496347 CAPN2P17655 700 aa18.8■□□□□ 0.6
HDAC4-213ENST00000496347 PDE1AP54750 535 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms