RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 GPHNQ9NQX3 736 aaPredicted RBP9.97□□□□□ -0.81
VPS13B-206ENST00000496144 SALL1Q9NSC2 1324 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 DLEC1Q9Y238 1755 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 TSPY3P0CV98 308 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 TSPY8P0CW00 308 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 CRHR2Q13324 411 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 UPF3BQ9BZI7 483 aaKnown RBP9.97□□□□□ -0.81
VPS13B-206ENST00000496144 FARP2O94887 1054 aaPredicted RBP9.96□□□□□ -0.81
VPS13B-206ENST00000496144 CREB3L3Q68CJ9 461 aa9.96□□□□□ -0.81
VPS13B-206ENST00000496144 NBPF3Q9H094 633 aa9.96□□□□□ -0.81
VPS13B-206ENST00000496144 RNF41Q9H4P4 317 aaPredicted RBP9.96□□□□□ -0.81
VPS13B-206ENST00000496144 PDS5AQ29RF7 1337 aaKnown RBP9.96□□□□□ -0.81
VPS13B-206ENST00000496144 SLC27A2O14975 620 aa9.96□□□□□ -0.81
VPS13B-206ENST00000496144 MRE11P49959 708 aa9.96□□□□□ -0.81
VPS13B-206ENST00000496144 SPP2Q13103 211 aa9.96□□□□□ -0.81
VPS13B-206ENST00000496144 ALDH8A1Q9H2A2 487 aaPredicted RBP9.96□□□□□ -0.81
VPS13B-206ENST00000496144 MYH7P12883 1935 aa9.96□□□□□ -0.81
VPS13B-206ENST00000496144 XRCC6P12956 609 aaKnown RBP eCLIP9.96□□□□□ -0.829e-6■■■□□ 15.7
VPS13B-206ENST00000496144 ARRDC4Q8NCT1 418 aa9.96□□□□□ -0.82
VPS13B-206ENST00000496144 PTPN22Q9Y2R2 807 aa9.96□□□□□ -0.82
VPS13B-206ENST00000496144 RBM8AQ9Y5S9 174 aaKnown RBP9.96□□□□□ -0.82
VPS13B-206ENST00000496144 PDRG1Q9NUG6 133 aa9.96□□□□□ -0.82
VPS13B-206ENST00000496144 SLC45A1Q9Y2W3 748 aa9.96□□□□□ -0.82
VPS13B-206ENST00000496144 TLR3O15455 904 aaKnown RBP9.96□□□□□ -0.82
VPS13B-206ENST00000496144 PAG1Q9NWQ8 432 aa9.96□□□□□ -0.82
VPS13B-206ENST00000496144 LIMCH1Q9UPQ0 1083 aa9.96□□□□□ -0.82
VPS13B-206ENST00000496144 MTMR7Q9Y216 660 aa9.96□□□□□ -0.82
VPS13B-206ENST00000496144 MYH15Q9Y2K3 1946 aa9.96□□□□□ -0.82
VPS13B-206ENST00000496144 PAPPA2Q9BXP8 1791 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 MSCO60682 206 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 MB21D1Q8N884 522 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 GRPEL1Q9HAV7 217 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 A0A1B0GUL6 1792 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 ADCK5Q3MIX3 580 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 TSPYL2Q9H2G4 693 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-206ENST00000496144 ARPP21Q9UBL0 812 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-206ENST00000496144 MAP3K11Q16584 847 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 NOM1Q5C9Z4 860 aaKnown RBP9.95□□□□□ -0.82
VPS13B-206ENST00000496144 PRPF38BQ5VTL8 546 aaKnown RBP9.95□□□□□ -0.82
VPS13B-206ENST00000496144 PLEKHH3Q7Z736 793 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 TICAM2Q86XR7 235 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 JAKMIP1Q96N16 626 aaKnown RBP9.95□□□□□ -0.82
VPS13B-206ENST00000496144 COL11A2P13942 1736 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-206ENST00000496144 RRP12Q5JTH9 1297 aaKnown RBP9.95□□□□□ -0.82
VPS13B-206ENST00000496144 ZNF589Q86UQ0 364 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-206ENST00000496144 TXNRD3Q86VQ6 643 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 CLMNQ96JQ2 1002 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 GMLQ99445 158 aa9.95□□□□□ -0.82
VPS13B-206ENST00000496144 TLR2O60603 784 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 FLOT1O75955 427 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS13B-206ENST00000496144 ZSCAN31Q96LW9 406 aaPredicted RBP9.94□□□□□ -0.82
VPS13B-206ENST00000496144 CTNNA3Q9UI47 895 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 SERPINB13Q9UIV8 391 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 AGTPBP1Q9UPW5 1226 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 PRDX5P30044 214 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 RASGRF1Q13972 1273 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 GPT2Q8TD30 523 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 AP5M1Q9H0R1 490 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 HMG20BQ9P0W2 317 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.94□□□□□ -0.82
VPS13B-206ENST00000496144 CYP46A1Q9Y6A2 500 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 PSMA5P28066 241 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 HMGCS2P54868 508 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 TSGA10IPQ3SY00 556 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 LDLRAD1Q5T700 205 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 DBNDD2Q9BQY9 259 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 ADORA1P30542 326 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 EHMT1Q9H9B1 1298 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 NAP1L2Q9ULW6 460 aaPredicted RBP9.94□□□□□ -0.82
VPS13B-206ENST00000496144 NOD1Q9Y239 953 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 DOCK2Q92608 1830 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 FER1L6Q2WGJ9 1857 aa9.94□□□□□ -0.82
VPS13B-206ENST00000496144 ASTN2O75129 1339 aaPredicted RBP9.94□□□□□ -0.82
VPS13B-206ENST00000496144 ICA1Q05084 483 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 OTOP1Q7RTM1 612 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 DDX49Q9Y6V7 483 aaKnown RBP9.93□□□□□ -0.82
VPS13B-206ENST00000496144 LARGE1O95461 756 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
VPS13B-206ENST00000496144 CHURC1Q8WUH1 139 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 SH2B1Q9NRF2 756 aaPredicted RBP9.93□□□□□ -0.82
VPS13B-206ENST00000496144 TSPY2A6NKD2 308 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 SNAP23O00161 211 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 HMGCRP04035 888 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 NOL9Q5SY16 702 aaKnown RBP9.93□□□□□ -0.82
VPS13B-206ENST00000496144 STK11IPQ8N1F8 1099 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 ANKRD13CQ8N6S4 541 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 GDF11O95390 407 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 CYP2B6P20813 491 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 ZAP70P43403 619 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 ZNF445P59923 1031 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 ZSCAN23Q3MJ62 389 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 BTBD19C9JJ37 291 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 TMEM179Q6ZVK1 233 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 FBXO40Q9UH90 709 aa9.93□□□□□ -0.82
VPS13B-206ENST00000496144 PRPF40AO75400 957 aaKnown RBP9.92□□□□□ -0.82
VPS13B-206ENST00000496144 CPA1P15085 419 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 RPS6KB1P23443 525 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 RNF20Q5VTR2 975 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 DUOX1Q9NRD9 1551 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms