RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 NT5C2P49902 561 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 CLEC10AQ8IUN9 316 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 DNAJC5GQ8N7S2 189 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 NCOA7Q8NI08 942 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 FEZ1Q99689 392 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.42■□□□□ 0.38
HDAC9-226ENST00000496026 USP26Q9BXU7 913 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 ARHGEF10LQ9HCE6 1279 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 KCNH4Q9UQ05 1017 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
HDAC9-226ENST00000496026 KDM4AO75164 1064 aa17.41■□□□□ 0.38
HDAC9-226ENST00000496026 CETPP11597 493 aa17.41■□□□□ 0.38
HDAC9-226ENST00000496026 HSPA4P34932 840 aa17.41■□□□□ 0.38
HDAC9-226ENST00000496026 SREBF2Q12772 1141 aa17.41■□□□□ 0.38
HDAC9-226ENST00000496026 MTMR2Q13614 643 aa17.41■□□□□ 0.38
HDAC9-226ENST00000496026 MS4A4AQ96JQ5 239 aa17.41■□□□□ 0.38
HDAC9-226ENST00000496026 ZIC5Q96T25 663 aa17.41■□□□□ 0.38
HDAC9-226ENST00000496026 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 LAMA4Q16363 1823 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 CCL15-CCL14A0A0B4J2E2 113 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 SEC24BO95487 1268 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 EEF2P13639 858 aaKnown RBP17.4■□□□□ 0.38
HDAC9-226ENST00000496026 INHBEP58166 350 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 KRT32Q14532 448 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
HDAC9-226ENST00000496026 CCL15Q16663 113 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 PPP4R3BQ5MIZ7 849 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 GADL1Q6ZQY3 521 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 STOX1Q6ZVD7 989 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 IQCA1Q86XH1 822 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
HDAC9-226ENST00000496026 ACER1Q8TDN7 264 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 CEP95Q96GE4 821 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 SH2D4AQ9H788 454 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 ZSWIM5Q9P217 1185 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 CLIP2Q9UDT6 1046 aa17.4■□□□□ 0.38
HDAC9-226ENST00000496026 IGKV6D-41A0A0C4DH26 115 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 A0A0G2JLL6 359 aaPredicted RBP17.39■□□□□ 0.37
HDAC9-226ENST00000496026 C19orf81C9J6K1 198 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 NMT2O60551 498 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 TTLL1O95922 423 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 USP14P54578 494 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 HMGCS2P54868 508 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 BACE1P56817 501 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 USP17L2Q6R6M4 530 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 FASTKD5Q7L8L6 764 aaKnown RBP17.39■□□□□ 0.37
HDAC9-226ENST00000496026 PRRT2Q7Z6L0 340 aaPredicted RBP17.39■□□□□ 0.37
HDAC9-226ENST00000496026 RASEFQ8IZ41 740 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 ZKSCAN3Q9BRR0 538 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 UBAC1Q9BSL1 405 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 NYAP2Q9P242 653 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 ATAD5Q96QE3 1844 aa17.39■□□□□ 0.37
HDAC9-226ENST00000496026 A0A1W2PRG0 241 aa17.38■□□□□ 0.37
HDAC9-226ENST00000496026 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
HDAC9-226ENST00000496026 SIAH1Q8IUQ4 282 aa17.38■□□□□ 0.37
HDAC9-226ENST00000496026 NKX2-3Q8TAU0 364 aa17.38■□□□□ 0.37
HDAC9-226ENST00000496026 BRI3BPQ8WY22 251 aa17.38■□□□□ 0.37
HDAC9-226ENST00000496026 KIAA1683Q9H0B3 1180 aa17.38■□□□□ 0.37
HDAC9-226ENST00000496026 IL17RBQ9NRM6 502 aa17.38■□□□□ 0.37
HDAC9-226ENST00000496026 TCP11L1Q9NUJ3 509 aa17.38■□□□□ 0.37
HDAC9-226ENST00000496026 MYH8P13535 1937 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 TESPA1A2RU30 521 aaPredicted RBP17.37■□□□□ 0.37
HDAC9-226ENST00000496026 RAD21O60216 631 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 TM4SF4P48230 202 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 SH3D19Q5HYK7 790 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 OTUD7BQ6GQQ9 843 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 CYB5R4Q7L1T6 521 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 KCNB2Q92953 911 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 NEK1Q96PY6 1258 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 GOPCQ9HD26 462 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 TMX2Q9Y320 296 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 SNX14Q9Y5W7 946 aa17.37■□□□□ 0.37
HDAC9-226ENST00000496026 DGKZQ13574 1117 aa17.36■□□□□ 0.37
HDAC9-226ENST00000496026 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
HDAC9-226ENST00000496026 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
HDAC9-226ENST00000496026 IFNL1Q8IU54 200 aa17.36■□□□□ 0.37
HDAC9-226ENST00000496026 MB21D2Q8IYB1 491 aaPredicted RBP17.36■□□□□ 0.37
HDAC9-226ENST00000496026 PROCA1Q8NCQ7 364 aaPredicted RBP17.36■□□□□ 0.37
HDAC9-226ENST00000496026 ZSCAN10Q96SZ4 725 aaPredicted RBP17.36■□□□□ 0.37
HDAC9-226ENST00000496026 ERICH2A1L162 156 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 BTBD19C9JJ37 291 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 MCM5P33992 734 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 MAP2K1Q02750 393 aaPredicted RBP17.35■□□□□ 0.37
HDAC9-226ENST00000496026 ADCK5Q3MIX3 580 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 LRRC47Q8N1G4 583 aaKnown RBP17.35■□□□□ 0.37
HDAC9-226ENST00000496026 MKL1Q969V6 931 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 JAKMIP1Q96N16 626 aaKnown RBP17.35■□□□□ 0.37
HDAC9-226ENST00000496026 TTC14Q96N46 770 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 PTPN18Q99952 460 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 VCPKMTQ9H867 229 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
HDAC9-226ENST00000496026 EMILIN3Q9NT22 766 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 AGTPBP1Q9UPW5 1226 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 TNKSO95271 1327 aa17.35■□□□□ 0.37
HDAC9-226ENST00000496026 IGF2BP3O00425 579 aaKnown RBP eCLIP17.34■□□□□ 0.37
HDAC9-226ENST00000496026 IFIT3O14879 490 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms