RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 ZNF287Q9HBT7 754 aa23.89■■□□□ 1.41
COL9A2-210ENST00000495948 LAMA4Q16363 1823 aa23.89■■□□□ 1.41
COL9A2-210ENST00000495948 C12orf42Q96LP6 360 aa23.88■■□□□ 1.41
COL9A2-210ENST00000495948 FEZ1Q99689 392 aa23.88■■□□□ 1.41
COL9A2-210ENST00000495948 TMOD4Q9NZQ9 345 aa23.88■■□□□ 1.41
COL9A2-210ENST00000495948 PNMA3Q9UL41 463 aa23.88■■□□□ 1.41
COL9A2-210ENST00000495948 SLC3A2P08195 630 aaKnown RBP23.87■■□□□ 1.41
COL9A2-210ENST00000495948 PABPC4Q13310 644 aaKnown RBP eCLIP23.87■■□□□ 1.41
COL9A2-210ENST00000495948 TREML2Q5T2D2 321 aa23.87■■□□□ 1.41
COL9A2-210ENST00000495948 KIAA1683Q9H0B3 1180 aa23.87■■□□□ 1.41
COL9A2-210ENST00000495948 PLIN4Q96Q06 1357 aa23.87■■□□□ 1.41
COL9A2-210ENST00000495948 RASA1P20936 1047 aa23.86■■□□□ 1.41
COL9A2-210ENST00000495948 USP14P54578 494 aa23.86■■□□□ 1.41
COL9A2-210ENST00000495948 ICA1Q05084 483 aa23.86■■□□□ 1.41
COL9A2-210ENST00000495948 DGKZQ13574 1117 aa23.86■■□□□ 1.41
COL9A2-210ENST00000495948 MKNK2Q9HBH9 465 aa23.86■■□□□ 1.41
COL9A2-210ENST00000495948 ANAPC4Q9UJX5 808 aa23.86■■□□□ 1.41
COL9A2-210ENST00000495948 PDE4BQ07343 736 aa23.85■■□□□ 1.41
COL9A2-210ENST00000495948 USP17L2Q6R6M4 530 aa23.85■■□□□ 1.41
COL9A2-210ENST00000495948 FGAP02671 866 aa23.84■■□□□ 1.41
COL9A2-210ENST00000495948 CYP2C8P10632 490 aa23.84■■□□□ 1.41
COL9A2-210ENST00000495948 SP3Q02447 781 aa23.84■■□□□ 1.41
COL9A2-210ENST00000495948 ACER1Q8TDN7 264 aa23.84■■□□□ 1.41
COL9A2-210ENST00000495948 ERO1AQ96HE7 468 aa23.84■■□□□ 1.41
COL9A2-210ENST00000495948 SH2D4AQ9H788 454 aa23.84■■□□□ 1.41
COL9A2-210ENST00000495948 ARHGEF10LQ9HCE6 1279 aa23.84■■□□□ 1.41
COL9A2-210ENST00000495948 EMILIN3Q9NT22 766 aa23.84■■□□□ 1.41
COL9A2-210ENST00000495948 CHMLP26374 656 aa23.83■■□□□ 1.41
COL9A2-210ENST00000495948 BMP2KLQ5H9B9 411 aa23.83■■□□□ 1.41
COL9A2-210ENST00000495948 C17orf99Q6UX52 265 aa23.83■■□□□ 1.41
COL9A2-210ENST00000495948 CTU1Q7Z7A3 348 aaKnown RBP23.83■■□□□ 1.41
COL9A2-210ENST00000495948 STK11IPQ8N1F8 1099 aa23.83■■□□□ 1.41
COL9A2-210ENST00000495948 RUFY2Q8WXA3 655 aa23.83■■□□□ 1.41
COL9A2-210ENST00000495948 DSCC1Q9BVC3 393 aa23.83■■□□□ 1.41
COL9A2-210ENST00000495948 KANSL2Q9H9L4 492 aa23.83■■□□□ 1.41
COL9A2-210ENST00000495948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.83■■□□□ 1.41
COL9A2-210ENST00000495948 HOXA7P31268 230 aaPredicted RBP23.82■■□□□ 1.4
COL9A2-210ENST00000495948 ZYXQ15942 572 aaKnown RBP23.82■■□□□ 1.4
COL9A2-210ENST00000495948 SKAP1Q86WV1 359 aa23.82■■□□□ 1.4
COL9A2-210ENST00000495948 CLEC10AQ8IUN9 316 aa23.82■■□□□ 1.4
COL9A2-210ENST00000495948 TNS4Q8IZW8 715 aa23.82■■□□□ 1.4
COL9A2-210ENST00000495948 SMCR8Q8TEV9 937 aaPredicted RBP23.82■■□□□ 1.4
COL9A2-210ENST00000495948 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.82■■□□□ 1.4
COL9A2-210ENST00000495948 IL25Q9H293 177 aa23.82■■□□□ 1.4
COL9A2-210ENST00000495948 PPP4R2Q9NY27 417 aa23.82■■□□□ 1.4
COL9A2-210ENST00000495948 A0A1W2PRG0 241 aa23.81■■□□□ 1.4
COL9A2-210ENST00000495948 PRDM1O75626 825 aa23.81■■□□□ 1.4
COL9A2-210ENST00000495948 VCAM1P19320 739 aa23.81■■□□□ 1.4
COL9A2-210ENST00000495948 IGKV6D-41A0A0C4DH26 115 aa23.8■■□□□ 1.4
COL9A2-210ENST00000495948 BCRP11274 1271 aa23.8■■□□□ 1.4
COL9A2-210ENST00000495948 OSBPP22059 807 aa23.8■■□□□ 1.4
COL9A2-210ENST00000495948 IRX3P78415 501 aaPredicted RBP23.8■■□□□ 1.4
COL9A2-210ENST00000495948 CTDSPL2Q05D32 466 aa23.8■■□□□ 1.4
COL9A2-210ENST00000495948 ZNF444Q8N0Y2 327 aaPredicted RBP23.8■■□□□ 1.4
COL9A2-210ENST00000495948 CD99L2Q8TCZ2 262 aa23.8■■□□□ 1.4
COL9A2-210ENST00000495948 ASCC2Q9H1I8 757 aaPredicted RBP23.8■■□□□ 1.4
COL9A2-210ENST00000495948 CPA4Q9UI42 421 aa23.8■■□□□ 1.4
COL9A2-210ENST00000495948 TMX2Q9Y320 296 aa23.8■■□□□ 1.4
COL9A2-210ENST00000495948 ORC4O43929 436 aa23.79■■□□□ 1.4
COL9A2-210ENST00000495948 FGRP09769 529 aa23.79■■□□□ 1.4
COL9A2-210ENST00000495948 SIAH1Q8IUQ4 282 aa23.79■■□□□ 1.4
COL9A2-210ENST00000495948 LPAR1Q92633 364 aa23.79■■□□□ 1.4
COL9A2-210ENST00000495948 PCP11498 1178 aaKnown RBP23.78■■□□□ 1.4
COL9A2-210ENST00000495948 EEF2P13639 858 aaKnown RBP23.78■■□□□ 1.4
COL9A2-210ENST00000495948 LACTBP83111 547 aaPredicted RBP23.78■■□□□ 1.4
COL9A2-210ENST00000495948 GTF3C2Q8WUA4 911 aaPredicted RBP23.78■■□□□ 1.4
COL9A2-210ENST00000495948 MCOLN1Q9GZU1 580 aa23.78■■□□□ 1.4
COL9A2-210ENST00000495948 VCPKMTQ9H867 229 aa23.78■■□□□ 1.4
COL9A2-210ENST00000495948 ZSWIM8A7E2V4 1837 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 SGSM2O43147 1006 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 TSPY3P0CV98 308 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 TSPY8P0CW00 308 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 GCLCP48506 637 aaPredicted RBP23.77■■□□□ 1.4
COL9A2-210ENST00000495948 PKN2Q16513 984 aaKnown RBP23.77■■□□□ 1.4
COL9A2-210ENST00000495948 FAM110CQ1W6H9 321 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 NEDD1Q8NHV4 660 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 STAG1Q8WVM7 1258 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 NYAP2Q9P242 653 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 SYNPO2Q9UMS6 1093 aa23.77■■□□□ 1.4
COL9A2-210ENST00000495948 USP17L15C9J2P7 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 USP17L13C9JLJ4 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 USP17L11C9JVI0 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 USP17L18D6R9N7 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 USP17L22D6RA61 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 USP17L17D6RBQ6 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 USP17L19D6RCP7 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 USP17L20D6RJB6 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 USP17L24Q0WX57 530 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 OTOP1Q7RTM1 612 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 CEP95Q96GE4 821 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 NBPF3Q9H094 633 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 TACC3Q9Y6A5 838 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 A0A0G2JMZ2 1700 aa23.76■■□□□ 1.39
COL9A2-210ENST00000495948 MYH4Q9Y623 1939 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 TSPY2A6NKD2 308 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 NT5C2P49902 561 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 HAND2P61296 217 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 HERVK_113P62684 666 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 KIF22Q14807 665 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 ARHGEF6Q15052 776 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms