RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 RFX5P48382 616 aaPredicted RBP16.32■□□□□ 0.2
TFE3-205ENST00000495940 RHBDL3P58872 404 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 ERVK-24P63145 666 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 ATP2B3Q16720 1220 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 Q3C1V9 767 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 POTEEQ6S8J3 1075 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
TFE3-205ENST00000495940 ADORA1P30542 326 aa16.31■□□□□ 0.2
TFE3-205ENST00000495940 RABEP1Q15276 862 aa16.31■□□□□ 0.2
TFE3-205ENST00000495940 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
TFE3-205ENST00000495940 FAM122AQ96E09 287 aa16.31■□□□□ 0.2
TFE3-205ENST00000495940 RBPJLQ9UBG7 517 aa16.31■□□□□ 0.2
TFE3-205ENST00000495940 ABCF2Q9UG63 623 aa16.31■□□□□ 0.2
TFE3-205ENST00000495940 DDX20Q9UHI6 824 aaKnown RBP16.31■□□□□ 0.2
TFE3-205ENST00000495940 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
TFE3-205ENST00000495940 NDUFB9Q9Y6M9 179 aa16.31■□□□□ 0.2
TFE3-205ENST00000495940 DNM1LO00429 736 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 EPB41L2O43491 1005 aaKnown RBP16.3■□□□□ 0.2
TFE3-205ENST00000495940 CNGA1P29973 690 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 DDIT3P35638 169 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 JAG1P78504 1218 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 GRIN2CQ14957 1233 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 SH3RF1Q7Z6J0 888 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 PLEKHH3Q7Z736 793 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 ZNF384Q8TF68 577 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 SIL1Q9H173 461 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 PDLIM7Q9NR12 457 aa16.3■□□□□ 0.2
TFE3-205ENST00000495940 GNL3LQ9NVN8 582 aaKnown RBP16.3■□□□□ 0.2
TFE3-205ENST00000495940 FOCADQ5VW36 1801 aa16.29■□□□□ 0.2
TFE3-205ENST00000495940 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
TFE3-205ENST00000495940 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
TFE3-205ENST00000495940 RASGRF1Q13972 1273 aa16.29■□□□□ 0.2
TFE3-205ENST00000495940 TRIM60Q495X7 471 aa16.29■□□□□ 0.2
TFE3-205ENST00000495940 GJC2Q5T442 439 aaPredicted RBP16.29■□□□□ 0.2
TFE3-205ENST00000495940 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
TFE3-205ENST00000495940 SIRT2Q8IXJ6 389 aa16.29■□□□□ 0.2
TFE3-205ENST00000495940 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
TFE3-205ENST00000495940 LPAR1Q92633 364 aa16.29■□□□□ 0.2
TFE3-205ENST00000495940 AS3MTQ9HBK9 375 aa16.29■□□□□ 0.2
TFE3-205ENST00000495940 BACE1P56817 501 aa16.28■□□□□ 0.2
TFE3-205ENST00000495940 TTC22Q5TAA0 569 aa16.28■□□□□ 0.2
TFE3-205ENST00000495940 ANO1Q5XXA6 986 aa16.28■□□□□ 0.2
TFE3-205ENST00000495940 CLEC17AQ6ZS10 378 aa16.28■□□□□ 0.2
TFE3-205ENST00000495940 TBC1D9Q6ZT07 1266 aa16.28■□□□□ 0.2
TFE3-205ENST00000495940 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
TFE3-205ENST00000495940 OSBPL3Q9H4L5 887 aa16.28■□□□□ 0.2
TFE3-205ENST00000495940 CWC22Q9HCG8 908 aaKnown RBP16.28■□□□□ 0.2
TFE3-205ENST00000495940 TMOD4Q9NZQ9 345 aa16.28■□□□□ 0.2
TFE3-205ENST00000495940 REV3LO60673 3130 aa16.28■□□□□ 0.2
TFE3-205ENST00000495940 TRIM43BA6NCK2 446 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 SEMA3EO15041 775 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 REC8O95072 547 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 GNAI3P08754 354 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 CYP2C19P33261 490 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 EPHB4P54760 987 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 MECOMQ03112 1051 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 MFSD14CQ5VZR4 134 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 CCDC102BQ68D86 513 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 TRIM43Q96BQ3 446 aaPredicted RBP16.27■□□□□ 0.2
TFE3-205ENST00000495940 FAM163AQ96GL9 167 aaPredicted RBP16.27■□□□□ 0.2
TFE3-205ENST00000495940 RNPC3Q96LT9 517 aaKnown RBP16.27■□□□□ 0.2
TFE3-205ENST00000495940 WDR18Q9BV38 432 aa16.27■□□□□ 0.2
TFE3-205ENST00000495940 ZNF236Q9UL36 1845 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 GPR75-ASB3A0A0A6YYF3 556 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 GOLGA6L22H0YM25 854 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 K7ELQ4 463 aaPredicted RBP16.26■□□□□ 0.19
TFE3-205ENST00000495940 CNMDO75829 334 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 ITGB8P26012 769 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 WDR78Q5VTH9 848 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 NPLOC4Q8TAT6 608 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 PPM1EQ8WY54 764 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 PLXNA1Q9UIW2 1896 aa16.26■□□□□ 0.19
TFE3-205ENST00000495940 DNAJB2P25686 324 aa16.25■□□□□ 0.19
TFE3-205ENST00000495940 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
TFE3-205ENST00000495940 MAP3K12Q12852 859 aa16.25■□□□□ 0.19
TFE3-205ENST00000495940 CEP85Q6P2H3 762 aa16.25■□□□□ 0.19
TFE3-205ENST00000495940 SLF2Q8IX21 1173 aa16.25■□□□□ 0.19
TFE3-205ENST00000495940 ADAMTS19Q8TE59 1207 aa16.25■□□□□ 0.19
TFE3-205ENST00000495940 EDC3Q96F86 508 aaKnown RBP16.25■□□□□ 0.19
TFE3-205ENST00000495940 USP44Q9H0E7 712 aa16.25■□□□□ 0.19
TFE3-205ENST00000495940 DNAJC18Q9H819 358 aa16.25■□□□□ 0.19
TFE3-205ENST00000495940 TCF20Q9UGU0 1960 aaKnown RBP16.24■□□□□ 0.19
TFE3-205ENST00000495940 GOLGA6L3A6NEY3 463 aa16.24■□□□□ 0.19
TFE3-205ENST00000495940 MSCO60682 206 aa16.24■□□□□ 0.19
TFE3-205ENST00000495940 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
TFE3-205ENST00000495940 GDF11O95390 407 aa16.24■□□□□ 0.19
TFE3-205ENST00000495940 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
TFE3-205ENST00000495940 CYBAP13498 195 aa16.24■□□□□ 0.19
TFE3-205ENST00000495940 SNX17Q15036 470 aa16.24■□□□□ 0.19
TFE3-205ENST00000495940 RAB3GAP1Q15042 981 aa16.24■□□□□ 0.19
TFE3-205ENST00000495940 CEP126Q9P2H0 1117 aa16.24■□□□□ 0.19
TFE3-205ENST00000495940 CHD9Q3L8U1 2897 aa16.24■□□□□ 0.19
TFE3-205ENST00000495940 KBTBD13C9JR72 458 aa16.23■□□□□ 0.19
TFE3-205ENST00000495940 MCM2P49736 904 aa16.23■□□□□ 0.19
TFE3-205ENST00000495940 NUCB2P80303 420 aa16.23■□□□□ 0.19
TFE3-205ENST00000495940 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms