RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 BTBD19C9JJ37 291 aa23.78■■□□□ 1.4
LMO4-204ENST00000495705 FOXN1O15353 648 aa23.78■■□□□ 1.4
LMO4-204ENST00000495705 FGRP09769 529 aa23.78■■□□□ 1.4
LMO4-204ENST00000495705 CTCFP49711 727 aaPredicted RBP23.78■■□□□ 1.4
LMO4-204ENST00000495705 HAND2P61296 217 aa23.78■■□□□ 1.4
LMO4-204ENST00000495705 ICA1Q05084 483 aa23.78■■□□□ 1.4
LMO4-204ENST00000495705 IMMTQ16891 758 aaKnown RBP23.78■■□□□ 1.4
LMO4-204ENST00000495705 GADL1Q6ZQY3 521 aa23.78■■□□□ 1.4
LMO4-204ENST00000495705 FEZ1Q99689 392 aa23.78■■□□□ 1.4
LMO4-204ENST00000495705 RNF41Q9H4P4 317 aaPredicted RBP23.78■■□□□ 1.4
LMO4-204ENST00000495705 PLIN4Q96Q06 1357 aa23.78■■□□□ 1.4
LMO4-204ENST00000495705 ORC4O43929 436 aa23.77■■□□□ 1.4
LMO4-204ENST00000495705 USP14P54578 494 aa23.77■■□□□ 1.4
LMO4-204ENST00000495705 HMGCS2P54868 508 aa23.77■■□□□ 1.4
LMO4-204ENST00000495705 FAM43AQ8N2R8 423 aa23.77■■□□□ 1.4
LMO4-204ENST00000495705 SH2D4AQ9H788 454 aa23.77■■□□□ 1.4
LMO4-204ENST00000495705 KANSL2Q9H9L4 492 aa23.77■■□□□ 1.4
LMO4-204ENST00000495705 ARHGEF10LQ9HCE6 1279 aa23.77■■□□□ 1.4
LMO4-204ENST00000495705 TMOD4Q9NZQ9 345 aa23.77■■□□□ 1.4
LMO4-204ENST00000495705 U3KPZ7 1027 aaPredicted RBP23.77■■□□□ 1.4
LMO4-204ENST00000495705 TSPY3P0CV98 308 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 TSPY8P0CW00 308 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 NT5C2P49902 561 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 PTH1RQ03431 593 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 AKNAD1Q5T1N1 836 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 STAG1Q8WVM7 1258 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 KIAA1683Q9H0B3 1180 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 AGTPBP1Q9UPW5 1226 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 SLC45A1Q9Y2W3 748 aa23.76■■□□□ 1.39
LMO4-204ENST00000495705 TAF1CQ15572 869 aaPredicted RBP23.75■■□□□ 1.39
LMO4-204ENST00000495705 GPAT2Q6NUI2 795 aa23.75■■□□□ 1.39
LMO4-204ENST00000495705 USP17L2Q6R6M4 530 aa23.75■■□□□ 1.39
LMO4-204ENST00000495705 MFSD6Q6ZSS7 791 aa23.75■■□□□ 1.39
LMO4-204ENST00000495705 NEDD1Q8NHV4 660 aa23.75■■□□□ 1.39
LMO4-204ENST00000495705 MAP4K1Q92918 833 aa23.75■■□□□ 1.39
LMO4-204ENST00000495705 TSPY2A6NKD2 308 aa23.74■■□□□ 1.39
LMO4-204ENST00000495705 PDHXO00330 501 aa23.74■■□□□ 1.39
LMO4-204ENST00000495705 HSPA8P11142 646 aaKnown RBP23.74■■□□□ 1.39
LMO4-204ENST00000495705 PABPC4Q13310 644 aaKnown RBP eCLIP23.74■■□□□ 1.39
LMO4-204ENST00000495705 TBC1D10CQ8IV04 446 aa23.74■■□□□ 1.39
LMO4-204ENST00000495705 ACER1Q8TDN7 264 aa23.74■■□□□ 1.39
LMO4-204ENST00000495705 C12orf42Q96LP6 360 aa23.74■■□□□ 1.39
LMO4-204ENST00000495705 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.74■■□□□ 1.39
LMO4-204ENST00000495705 NBPF3Q9H094 633 aa23.74■■□□□ 1.39
LMO4-204ENST00000495705 ZFYVE28Q9HCC9 887 aa23.74■■□□□ 1.39
LMO4-204ENST00000495705 TOMM22Q9NS69 142 aa23.74■■□□□ 1.39
LMO4-204ENST00000495705 IGKV6D-41A0A0C4DH26 115 aa23.73■■□□□ 1.39
LMO4-204ENST00000495705 TFAP4Q01664 338 aa23.73■■□□□ 1.39
LMO4-204ENST00000495705 PPP4R3BQ5MIZ7 849 aa23.73■■□□□ 1.39
LMO4-204ENST00000495705 LSG1Q9H089 658 aaKnown RBP23.73■■□□□ 1.39
LMO4-204ENST00000495705 ANO2Q9NQ90 1003 aa23.73■■□□□ 1.39
LMO4-204ENST00000495705 TSKSQ9UJT2 592 aa23.73■■□□□ 1.39
LMO4-204ENST00000495705 TMX2Q9Y320 296 aa23.73■■□□□ 1.39
LMO4-204ENST00000495705 TACC3Q9Y6A5 838 aa23.73■■□□□ 1.39
LMO4-204ENST00000495705 MYH4Q9Y623 1939 aa23.72■■□□□ 1.39
LMO4-204ENST00000495705 RANBP6O60518 1105 aaKnown RBP23.72■■□□□ 1.39
LMO4-204ENST00000495705 TBC1D8O95759 1140 aa23.72■■□□□ 1.39
LMO4-204ENST00000495705 CRHR2Q13324 411 aa23.72■■□□□ 1.39
LMO4-204ENST00000495705 NOM1Q5C9Z4 860 aaKnown RBP23.72■■□□□ 1.39
LMO4-204ENST00000495705 FAM47AQ5JRC9 791 aa23.72■■□□□ 1.39
LMO4-204ENST00000495705 CLEC10AQ8IUN9 316 aa23.72■■□□□ 1.39
LMO4-204ENST00000495705 PARK7Q99497 189 aaKnown RBP23.72■■□□□ 1.39
LMO4-204ENST00000495705 INCENPQ9NQS7 918 aa23.72■■□□□ 1.39
LMO4-204ENST00000495705 NYAP2Q9P242 653 aa23.72■■□□□ 1.39
LMO4-204ENST00000495705 PNMA3Q9UL41 463 aa23.72■■□□□ 1.39
LMO4-204ENST00000495705 A0A1W2PRG0 241 aa23.71■■□□□ 1.39
LMO4-204ENST00000495705 EEF2P13639 858 aaKnown RBP23.71■■□□□ 1.39
LMO4-204ENST00000495705 ZYXQ15942 572 aaKnown RBP23.71■■□□□ 1.39
LMO4-204ENST00000495705 RRP12Q5JTH9 1297 aaKnown RBP23.71■■□□□ 1.39
LMO4-204ENST00000495705 TREML2Q5T2D2 321 aa23.71■■□□□ 1.39
LMO4-204ENST00000495705 EMILIN3Q9NT22 766 aa23.71■■□□□ 1.39
LMO4-204ENST00000495705 RBM8AQ9Y5S9 174 aaKnown RBP23.71■■□□□ 1.39
LMO4-204ENST00000495705 LBX1P52954 281 aa23.7■■□□□ 1.38
LMO4-204ENST00000495705 ATP2B2Q01814 1243 aa23.7■■□□□ 1.38
LMO4-204ENST00000495705 DGKZQ13574 1117 aa23.7■■□□□ 1.38
LMO4-204ENST00000495705 SIAH1Q8IUQ4 282 aa23.7■■□□□ 1.38
LMO4-204ENST00000495705 ESR2Q92731 530 aa23.7■■□□□ 1.38
LMO4-204ENST00000495705 CEP95Q96GE4 821 aa23.7■■□□□ 1.38
LMO4-204ENST00000495705 CNNM2Q9H8M5 875 aa23.7■■□□□ 1.38
LMO4-204ENST00000495705 MTMR4Q9NYA4 1195 aa23.7■■□□□ 1.38
LMO4-204ENST00000495705 NEDD4P46934 1319 aa23.69■■□□□ 1.38
LMO4-204ENST00000495705 TTLL1O95922 423 aa23.69■■□□□ 1.38
LMO4-204ENST00000495705 CYP21A2P08686 494 aa23.69■■□□□ 1.38
LMO4-204ENST00000495705 HOXA7P31268 230 aaPredicted RBP23.69■■□□□ 1.38
LMO4-204ENST00000495705 LPAR1Q92633 364 aa23.69■■□□□ 1.38
LMO4-204ENST00000495705 SYNPO2Q9UMS6 1093 aa23.69■■□□□ 1.38
LMO4-204ENST00000495705 TLR2O60603 784 aa23.68■■□□□ 1.38
LMO4-204ENST00000495705 VCAM1P19320 739 aa23.68■■□□□ 1.38
LMO4-204ENST00000495705 OSBPP22059 807 aa23.68■■□□□ 1.38
LMO4-204ENST00000495705 KRT23Q9C075 422 aa23.68■■□□□ 1.38
LMO4-204ENST00000495705 VCPKMTQ9H867 229 aa23.68■■□□□ 1.38
LMO4-204ENST00000495705 GOPCQ9HD26 462 aa23.68■■□□□ 1.38
LMO4-204ENST00000495705 PRDM10Q9NQV6 1147 aa23.68■■□□□ 1.38
LMO4-204ENST00000495705 GPR25O00155 361 aa23.67■■□□□ 1.38
LMO4-204ENST00000495705 MKL1Q969V6 931 aa23.67■■□□□ 1.38
LMO4-204ENST00000495705 R3HDMLQ9H3Y0 253 aa23.67■■□□□ 1.38
LMO4-204ENST00000495705 TCP11L1Q9NUJ3 509 aa23.67■■□□□ 1.38
LMO4-204ENST00000495705 REC8O95072 547 aa23.66■■□□□ 1.38
LMO4-204ENST00000495705 IRX3P78415 501 aaPredicted RBP23.66■■□□□ 1.38
LMO4-204ENST00000495705 TRDNQ13061 729 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms