RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 SHMT1P34896 483 aa14.68□□□□□ -0.06
SHROOM1-206ENST00000495680 RAB3GAP1Q15042 981 aa14.68□□□□□ -0.06
SHROOM1-206ENST00000495680 EHD4Q9H223 541 aa14.68□□□□□ -0.06
SHROOM1-206ENST00000495680 NAV1Q8NEY1 1877 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 A0A1W2PPC1 479 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 IGSF3O75054 1194 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 VCAM1P19320 739 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 RGS2P41220 211 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 MAP3K12Q12852 859 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 PDE3AQ14432 1141 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 CERKLQ49MI3 558 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 LHX8Q68G74 356 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 PLEKHH3Q7Z736 793 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 FLRT1Q9NZU1 646 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 BTBD7Q9P203 1132 aa14.67□□□□□ -0.06
SHROOM1-206ENST00000495680 FRMPD3Q5JV73 1810 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L15C9J2P7 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L13C9JLJ4 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L11C9JVI0 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L18D6R9N7 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L22D6RA61 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L17D6RBQ6 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L19D6RCP7 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L20D6RJB6 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 COL6A1P12109 1028 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L24Q0WX57 530 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 ABCB5Q2M3G0 1257 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 SLFNL1Q499Z3 407 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 CATSPERGQ6ZRH7 1159 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 CCAR1Q8IX12 1150 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 MIER1Q8N108 512 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 EDC3Q96F86 508 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 APBA2Q99767 749 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 KIAA1683Q9H0B3 1180 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 RABGAP1Q9Y3P9 1069 aa14.66□□□□□ -0.06
SHROOM1-206ENST00000495680 A0A1W2PRG0 241 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 APBB1O00213 710 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 CYP2D6P10635 497 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 PDE6AP16499 860 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 MAGEA10P43363 369 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 GABPAQ06546 454 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 MAP2K5Q13163 448 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 SEPT2Q15019 361 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 TTC6Q86TZ1 520 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 SLC44A5Q8NCS7 719 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 GTF3C2Q8WUA4 911 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 RPAP3Q9H6T3 665 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-206ENST00000495680 MAGEB6P1A0A0J9YX57 407 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 SPDYE16A6NNV3 312 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 SMIM22K7EJ46 135 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 BMP8BP34820 402 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 LRRC26Q2I0M4 334 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 WDR78Q5VTH9 848 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 ERC1Q8IUD2 1116 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 LCORLQ8N3X6 602 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 NPLOC4Q8TAT6 608 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 SDR42E1Q8WUS8 393 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 BCL11AQ9H165 835 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 ZNF532Q9HCE3 1301 aa14.64□□□□□ -0.07
SHROOM1-206ENST00000495680 RLFQ13129 1914 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 TCRBV5S4A2TA0A5A2 114 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 GOLIM4O00461 696 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 CHGBP05060 677 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 POLR3DP05423 398 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 PTPREP23469 700 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 KIAA1755Q5JYT7 1200 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 SLC9C2Q5TAH2 1124 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 CERS3Q8IU89 383 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 CLEC10AQ8IUN9 316 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 SIRT2Q8IXJ6 389 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 TRMT44Q8IYL2 757 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 CWC22Q9HCG8 908 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 COL6A3P12111 3177 aa14.63□□□□□ -0.07
SHROOM1-206ENST00000495680 CYP2C19P33261 490 aa14.62□□□□□ -0.07
SHROOM1-206ENST00000495680 USP14P54578 494 aa14.62□□□□□ -0.07
SHROOM1-206ENST00000495680 LBX2Q6XYB7 198 aa14.62□□□□□ -0.07
SHROOM1-206ENST00000495680 TRPV1Q8NER1 839 aa14.62□□□□□ -0.07
SHROOM1-206ENST00000495680 CABP5Q9NP86 173 aa14.62□□□□□ -0.07
SHROOM1-206ENST00000495680 MCM9Q9NXL9 1143 aa14.62□□□□□ -0.07
SHROOM1-206ENST00000495680 SLC15A5A6NIM6 579 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 MPHOSPH10O00566 681 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 PRKAB2O43741 272 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 IGHA2P01877 340 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 CCNA1P78396 465 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 GRB14Q14449 540 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 Q7L0L9 218 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 DYNLL2Q96FJ2 89 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 CRNKL1Q9BZJ0 848 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 ARMT1Q9H993 441 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 DCP1AQ9NPI6 582 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 A0A0G2JMZ2 1700 aa14.61□□□□□ -0.07
SHROOM1-206ENST00000495680 BAZ2AQ9UIF9 1905 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-206ENST00000495680 CYP2D7A0A087X1C5 515 aa14.6□□□□□ -0.07
SHROOM1-206ENST00000495680 HOXC6P09630 235 aa14.6□□□□□ -0.07
SHROOM1-206ENST00000495680 TTF1Q15361 905 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-206ENST00000495680 TMED8Q6PL24 325 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-206ENST00000495680 SIAH1Q8IUQ4 282 aa14.6□□□□□ -0.07
SHROOM1-206ENST00000495680 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms