RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 GMIPQ9P107 970 aa8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 DDX41Q9UJV9 622 aaKnown RBP8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 KCNH3Q9ULD8 1083 aa8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 PLAGL2Q9UPG8 496 aa8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 OAS3Q9Y6K5 1087 aaKnown RBP8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 ADAMTS4O75173 837 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 IMPDH2P12268 514 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 RAG1P15918 1043 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 CRKP46108 304 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 PLCL1Q15111 1095 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 GK5Q6ZS86 529 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 SLITRK4Q8IW52 837 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 SPACA3Q8IXA5 215 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 PIWIL2Q8TC59 973 aaKnown RBP8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 PCDHGB7Q9Y5F8 929 aa8.76□□□□□ -1.01
NCKAP1-208ENST00000495619 CHURC1-FNTBB4DL54 471 aa8.75□□□□□ -1.01
NCKAP1-208ENST00000495619 BNIP3Q12983 259 aa8.75□□□□□ -1.01
NCKAP1-208ENST00000495619 NKPD1Q17RQ9 610 aa8.75□□□□□ -1.01
NCKAP1-208ENST00000495619 CDKAL1Q5VV42 579 aa8.75□□□□□ -1.01
NCKAP1-208ENST00000495619 EAF1Q96JC9 268 aaPredicted RBP8.75□□□□□ -1.01
NCKAP1-208ENST00000495619 PAK6Q9NQU5 681 aaPredicted RBP8.75□□□□□ -1.01
NCKAP1-208ENST00000495619 KIAA1522Q9P206 1035 aaPredicted RBP8.75□□□□□ -1.01
NCKAP1-208ENST00000495619 IKZF1Q13422 519 aa8.74□□□□□ -1.01
NCKAP1-208ENST00000495619 NT5DC4Q86YG4 428 aa8.74□□□□□ -1.01
NCKAP1-208ENST00000495619 DNAJB8Q8NHS0 232 aa8.74□□□□□ -1.01
NCKAP1-208ENST00000495619 CAPN6Q9Y6Q1 641 aa8.74□□□□□ -1.01
NCKAP1-208ENST00000495619 U3KQE9 123 aa8.74□□□□□ -1.01
NCKAP1-208ENST00000495619 UNCXA6NJT0 531 aa8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 SLC22A31A6NKX4 558 aa8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 RAD51AP2Q09MP3 1159 aa8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 COL9A2Q14055 689 aaPredicted RBP8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 ARSHQ5FYA8 562 aa8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 THAP5Q7Z6K1 395 aa8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 PI4K2BQ8TCG2 481 aa8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 RNF141Q8WVD5 230 aa8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 TRIT1Q9H3H1 467 aaKnown RBP8.73□□□□□ -1.01
NCKAP1-208ENST00000495619 RGS13O14921 159 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 CD8BP10966 210 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 RNF4P78317 190 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 SPRED2Q7Z698 418 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 ABI1Q8IZP0 508 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 HSPA12BQ96MM6 686 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 FERD3LQ96RJ6 166 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 KIF2CQ99661 725 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 ASPNQ9BXN1 380 aa8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.72□□□□□ -1.01
NCKAP1-208ENST00000495619 PRR33A8MZF0 331 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 FUT4P22083 530 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 CCNFP41002 786 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 RACK1P63244 317 aaKnown RBP8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 HDLBPQ00341 1268 aaKnown RBP8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 CLCQ05315 142 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 CDCP2Q5VXM1 449 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 ZNF574Q6ZN55 896 aaPredicted RBP8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 NLRC3Q7RTR2 1065 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 METTL16Q86W50 562 aaKnown RBP8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 BAHD1Q8TBE0 780 aaPredicted RBP8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 PPP1R13LQ8WUF5 828 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 ASCC2Q9H1I8 757 aaPredicted RBP8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 GPATCH2Q9NW75 528 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 LMCD1Q9NZU5 365 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 PITPNM2Q9BZ72 1349 aa8.71□□□□□ -1.02
NCKAP1-208ENST00000495619 H3BS24 57 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 TNK2Q07912 1038 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 FBXW10Q5XX13 1052 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 OVOS1Q6IE37 1185 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 TMEM40Q8WWA1 233 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 KREMEN1Q96MU8 473 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 CCSER2Q9H7U1 834 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 ZSWIM5Q9P217 1185 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 CNTNAP4Q9C0A0 1308 aa8.7□□□□□ -1.02
NCKAP1-208ENST00000495619 RBM25P49756 843 aaKnown RBP8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 ZP2Q05996 745 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 PAK2Q13177 524 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 C9orf131Q5VYM1 1079 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 SLC23A3Q6PIS1 610 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 TMPRSS7Q7RTY8 843 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 UBE2FQ969M7 185 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 CCDC120Q96HB5 630 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 CRBNQ96SW2 442 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 TGIF2Q9GZN2 237 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 CNNM2Q9H8M5 875 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 ST14Q9Y5Y6 855 aa8.69□□□□□ -1.02
NCKAP1-208ENST00000495619 BIN1O00499 593 aa8.68□□□□□ -1.02
NCKAP1-208ENST00000495619 DNAJA2O60884 412 aa8.68□□□□□ -1.02
NCKAP1-208ENST00000495619 NFXL1Q6ZNB6 911 aa8.68□□□□□ -1.02
NCKAP1-208ENST00000495619 GPRASP2Q96D09 838 aa8.68□□□□□ -1.02
NCKAP1-208ENST00000495619 ATG4CQ96DT6 458 aa8.68□□□□□ -1.02
NCKAP1-208ENST00000495619 ADGRE2Q9UHX3 823 aa8.68□□□□□ -1.02
NCKAP1-208ENST00000495619 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
NCKAP1-208ENST00000495619 MEIS3P2A8K0S8 358 aa8.67□□□□□ -1.02
NCKAP1-208ENST00000495619 CD96P40200 585 aa8.67□□□□□ -1.02
NCKAP1-208ENST00000495619 ZNF792Q3KQV3 632 aa8.67□□□□□ -1.02
NCKAP1-208ENST00000495619 SYTL4Q96C24 671 aaPredicted RBP8.67□□□□□ -1.02
NCKAP1-208ENST00000495619 DHRS1Q96LJ7 313 aa8.67□□□□□ -1.02
NCKAP1-208ENST00000495619 ATP13A1Q9HD20 1204 aa8.67□□□□□ -1.02
NCKAP1-208ENST00000495619 SEMA3GQ9NS98 782 aa8.67□□□□□ -1.02
NCKAP1-208ENST00000495619 COL17A1Q9UMD9 1497 aaPredicted RBP8.66□□□□□ -1.02
NCKAP1-208ENST00000495619 CLEC3AO75596 197 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms