RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 CCL5P13501 91 aa17.15■□□□□ 0.34
RPRD1B-206ENST00000495457 VCAM1P19320 739 aa17.15■□□□□ 0.34
RPRD1B-206ENST00000495457 IRF5Q13568 498 aa17.15■□□□□ 0.34
RPRD1B-206ENST00000495457 C12orf60Q5U649 245 aa17.15■□□□□ 0.34
RPRD1B-206ENST00000495457 PI4K2BQ8TCG2 481 aa17.15■□□□□ 0.34
RPRD1B-206ENST00000495457 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
RPRD1B-206ENST00000495457 SWAP70Q9UH65 585 aa17.15■□□□□ 0.34
RPRD1B-206ENST00000495457 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
RPRD1B-206ENST00000495457 MGAMO43451 1857 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 A0A1W2PRG0 241 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 AKR1B1P15121 316 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 USP14P54578 494 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 UBXN2AP68543 259 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 Q3C1V9 767 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 CLEC10AQ8IUN9 316 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 GPRC5AQ8NFJ5 357 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 PAGR1Q9BTK6 254 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 TTC41PQ6P2S7 1318 aa17.14■□□□□ 0.33
RPRD1B-206ENST00000495457 PDE4DIPQ5VU43 2346 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L15C9J2P7 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L13C9JLJ4 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L11C9JVI0 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L18D6R9N7 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L22D6RA61 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L17D6RBQ6 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L19D6RCP7 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L20D6RJB6 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 RNF113AO15541 343 aaKnown RBP17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 INHAP05111 366 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 CDK8P49336 464 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 USP17L24Q0WX57 530 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 PRPF38BQ5VTL8 546 aaKnown RBP17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 PXYLP1Q8TE99 480 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 APPBP2Q92624 585 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 DDRGK1Q96HY6 314 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 RNF208Q9H0X6 261 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 UNC93B1Q9H1C4 597 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 GJD2Q9UKL4 321 aa17.13■□□□□ 0.33
RPRD1B-206ENST00000495457 M0R2C6 588 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 ERVK-9P63128 1117 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 ERVK-24P63145 666 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 ANKRD45Q5TZF3 282 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 CATSPERGQ6ZRH7 1159 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 TMEM179Q6ZVK1 233 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 PORCNQ9H237 461 aa17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 RPAP3Q9H6T3 665 aaPredicted RBP17.12■□□□□ 0.33
RPRD1B-206ENST00000495457 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 ERC2O15083 957 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 GPAA1O43292 621 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 CNMDO75829 334 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 GLRX3O76003 335 aaKnown RBP17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 GJB1P08034 283 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 MX1P20591 662 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 KIAA1755Q5JYT7 1200 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 SALL3Q9BXA9 1300 aa17.11■□□□□ 0.33
RPRD1B-206ENST00000495457 ZFYP08048 801 aaPredicted RBP17.1■□□□□ 0.33
RPRD1B-206ENST00000495457 GJA8P48165 433 aa17.1■□□□□ 0.33
RPRD1B-206ENST00000495457 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
RPRD1B-206ENST00000495457 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
RPRD1B-206ENST00000495457 GTF3C2Q8WUA4 911 aaPredicted RBP17.1■□□□□ 0.33
RPRD1B-206ENST00000495457 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
RPRD1B-206ENST00000495457 EPB41L4AQ9HCS5 686 aaPredicted RBP17.1■□□□□ 0.33
RPRD1B-206ENST00000495457 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
RPRD1B-206ENST00000495457 MYH7P12883 1935 aa17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 BAZ2AQ9UIF9 1905 aaKnown RBP17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 CYP2B6P20813 491 aa17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 ICA1Q05084 483 aa17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 TRIM32Q13049 653 aa17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 CCDC17Q96LX7 622 aa17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 RABGAP1Q9Y3P9 1069 aa17.09■□□□□ 0.33
RPRD1B-206ENST00000495457 SPDYE16A6NNV3 312 aaPredicted RBP17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 MAPK4P31152 587 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 SBK1Q52WX2 424 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 CCAR1Q8IX12 1150 aaKnown RBP17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 SPICE1Q8N0Z3 855 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 BTBD7Q9P203 1132 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 TMX2Q9Y320 296 aa17.08■□□□□ 0.32
RPRD1B-206ENST00000495457 HMGCRP04035 888 aa17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 LBX2Q6XYB7 198 aa17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 SOCS4Q8WXH5 440 aa17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 TRIB2Q92519 343 aa17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 DEFB118Q96PH6 123 aa17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 TANGO6Q9C0B7 1094 aa17.07■□□□□ 0.32
RPRD1B-206ENST00000495457 ARHGEF10LQ9HCE6 1279 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms