RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, human

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLXNA3-208	ENST00000495040	AMOTL1	Q8IY63	956 aa		32.07	■■■□□ 2.72
PLXNA3-208	ENST00000495040	ACER1	Q8TDN7	264 aa		32.07	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L15	C9J2P7	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L13	C9JLJ4	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L11	C9JVI0	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L18	D6R9N7	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L22	D6RA61	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L17	D6RBQ6	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L19	D6RCP7	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L20	D6RJB6	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	MPHOSPH10	O00566	681 aa	Known RBP	32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L24	Q0WX57	530 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	SEPT2	Q15019	361 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	KBTBD3	Q8NAB2	608 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	PUS7L	Q9H0K6	701 aa	Known RBP	32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	RBPJL	Q9UBG7	517 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	SLC4A4	Q9Y6R1	1079 aa		32.06	■■■□□ 2.72
PLXNA3-208	ENST00000495040	INHA	P05111	366 aa		32.05	■■■□□ 2.72
PLXNA3-208	ENST00000495040	GJA8	P48165	433 aa		32.05	■■■□□ 2.72
PLXNA3-208	ENST00000495040	TXNRD2	Q9NNW7	524 aa		32.05	■■■□□ 2.72
PLXNA3-208	ENST00000495040	GJD2	Q9UKL4	321 aa		32.04	■■■□□ 2.72
PLXNA3-208	ENST00000495040	VCAM1	P19320	739 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	C12orf60	Q5U649	245 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	TSHZ3	Q63HK5	1081 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	CATSPERG	Q6ZRH7	1159 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	TMEM179	Q6ZVK1	233 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	SLC44A5	Q8NCS7	719 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	SHISA4	Q96DD7	197 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	DYNLL2	Q96FJ2	89 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	UNC93B1	Q9H1C4	597 aa		32.03	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L12	C9JPN9	530 aa		32.02	■■■□□ 2.72
PLXNA3-208	ENST00000495040	USP17L21	D6R901	530 aa		32.02	■■■□□ 2.72
PLXNA3-208	ENST00000495040	ERVK-9	P63128	1117 aa		32.02	■■■□□ 2.72
PLXNA3-208	ENST00000495040	ERVK-24	P63145	666 aa		32.02	■■■□□ 2.72
PLXNA3-208	ENST00000495040	PAGR1	Q9BTK6	254 aa		32.02	■■■□□ 2.72
PLXNA3-208	ENST00000495040	TTC41P	Q6P2S7	1318 aa		32.01	■■■□□ 2.72
PLXNA3-208	ENST00000495040	PEX10	O60683	326 aa		32.01	■■■□□ 2.71
PLXNA3-208	ENST00000495040	MAPK4	P31152	587 aa		32.01	■■■□□ 2.71
PLXNA3-208	ENST00000495040		Q3C1V9	767 aa		32	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CCAR1	Q8IX12	1150 aa	Known RBP	32	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CCDC17	Q96LX7	622 aa		32	■■■□□ 2.71
PLXNA3-208	ENST00000495040	YTHDC1	Q96MU7	727 aa	Known RBP	32	■■■□□ 2.71
PLXNA3-208	ENST00000495040	RABGAP1	Q9Y3P9	1069 aa		32	■■■□□ 2.71
PLXNA3-208	ENST00000495040	PLXNB2	O15031	1838 aa		32	■■■□□ 2.71
PLXNA3-208	ENST00000495040	ERC2	O15083	957 aa		31.99	■■■□□ 2.71
PLXNA3-208	ENST00000495040	ZFY	P08048	801 aa	Predicted RBP	31.99	■■■□□ 2.71
PLXNA3-208	ENST00000495040	U2AF1L4	Q8WU68	220 aa	Known RBP	31.99	■■■□□ 2.71
PLXNA3-208	ENST00000495040	APPBP2	Q92624	585 aa		31.99	■■■□□ 2.71
PLXNA3-208	ENST00000495040	STRBP	Q96SI9	672 aa	Known RBP	31.99	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CRBN	Q96SW2	442 aa		31.99	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CYP2D7	A0A087X1C5	515 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040		A0A1W2PRG0	241 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	RNF113A	O15541	343 aa	Known RBP	31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CAPN2	P17655	700 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CDK8	P49336	464 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CTR9	Q6PD62	1173 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	POTEE	Q6S8J3	1075 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	C16orf86	Q6ZW13	317 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	SOCS4	Q8WXH5	440 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	NUDT12	Q9BQG2	462 aa		31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	RPAP3	Q9H6T3	665 aa	Predicted RBP	31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	ARPP21	Q9UBL0	812 aa	Predicted RBP	31.98	■■■□□ 2.71
PLXNA3-208	ENST00000495040	SGPL1	O95470	568 aa		31.97	■■■□□ 2.71
PLXNA3-208	ENST00000495040	HMGCR	P04035	888 aa		31.97	■■■□□ 2.71
PLXNA3-208	ENST00000495040	AKR1B1	P15121	316 aa		31.97	■■■□□ 2.71
PLXNA3-208	ENST00000495040	LRRFIP1	Q32MZ4	808 aa	Known RBP	31.97	■■■□□ 2.71
PLXNA3-208	ENST00000495040	LBX2	Q6XYB7	198 aa		31.97	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CCNA1	P78396	465 aa		31.96	■■■□□ 2.71
PLXNA3-208	ENST00000495040	OSBP2	Q969R2	916 aa		31.96	■■■□□ 2.71
PLXNA3-208	ENST00000495040	PORCN	Q9H237	461 aa		31.96	■■■□□ 2.71
PLXNA3-208	ENST00000495040	ARHGEF10L	Q9HCE6	1279 aa		31.96	■■■□□ 2.71
PLXNA3-208	ENST00000495040	SMIM22	K7EJ46	135 aa		31.95	■■■□□ 2.71
PLXNA3-208	ENST00000495040	GLRX3	O76003	335 aa	Known RBP	31.95	■■■□□ 2.71
PLXNA3-208	ENST00000495040	GIMAP6	Q6P9H5	292 aa		31.95	■■■□□ 2.71
PLXNA3-208	ENST00000495040	SH2D4A	Q9H788	454 aa		31.95	■■■□□ 2.71
PLXNA3-208	ENST00000495040	PAK6	Q9NQU5	681 aa	Predicted RBP	31.95	■■■□□ 2.71
PLXNA3-208	ENST00000495040	ZBTB47	Q9UFB7	747 aa	Predicted RBP	31.95	■■■□□ 2.71
PLXNA3-208	ENST00000495040	CNMD	O75829	334 aa		31.94	■■■□□ 2.7
PLXNA3-208	ENST00000495040	CYP2B6	P20813	491 aa		31.94	■■■□□ 2.7
PLXNA3-208	ENST00000495040	ICA1	Q05084	483 aa		31.94	■■■□□ 2.7
PLXNA3-208	ENST00000495040	GPR142	Q7Z601	462 aa		31.94	■■■□□ 2.7
PLXNA3-208	ENST00000495040	PLEKHH3	Q7Z736	793 aa		31.94	■■■□□ 2.7
PLXNA3-208	ENST00000495040	PI4K2B	Q8TCG2	481 aa		31.94	■■■□□ 2.7
PLXNA3-208	ENST00000495040	GSG1L2	A8MUP6	293 aa		31.93	■■■□□ 2.7
PLXNA3-208	ENST00000495040	XRCC5	P13010	732 aa	Known RBP	31.93	■■■□□ 2.7
PLXNA3-208	ENST00000495040	SBK1	Q52WX2	424 aa		31.93	■■■□□ 2.7
PLXNA3-208	ENST00000495040	OTUD7A	Q8TE49	926 aa	Predicted RBP	31.93	■■■□□ 2.7
PLXNA3-208	ENST00000495040	GCC1	Q96CN9	775 aa		31.93	■■■□□ 2.7
PLXNA3-208	ENST00000495040	DEFB118	Q96PH6	123 aa		31.93	■■■□□ 2.7
PLXNA3-208	ENST00000495040	CWC22	Q9HCG8	908 aa	Known RBP	31.93	■■■□□ 2.7
PLXNA3-208	ENST00000495040	SPDYE16	A6NNV3	312 aa	Predicted RBP	31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	GNAT2	P19087	354 aa		31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	MX1	P20591	662 aa		31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	COG2	Q14746	738 aa		31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	UBE2Q1	Q7Z7E8	422 aa		31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	SIAH1	Q8IUQ4	282 aa		31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	LPAR1	Q92633	364 aa		31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	HOXC10	Q9NYD6	342 aa		31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	TMX2	Q9Y320	296 aa		31.92	■■■□□ 2.7
PLXNA3-208	ENST00000495040	GPAA1	O43292	621 aa		31.91	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms