RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SCNN1DP51172 638 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 ZDHHC15Q96MV8 337 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 USP28Q96RU2 1077 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 PSMD1Q99460 953 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 ECM29Q5VYK3 1845 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 KIF13BQ9NQT8 1826 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 MYH1P12882 1939 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 SCN9AQ15858 1988 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 CRKP46108 304 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 APOBEC3HQ6NTF7 200 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 SLC44A5Q8NCS7 719 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 CTCFLQ8NI51 663 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 IL17RBQ9NRM6 502 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 USP40Q9NVE5 1235 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 USP25Q9UHP3 1055 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 PPIP5K2O43314 1243 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 DPEP1P16444 411 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 KCNA3P22001 575 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 FUT2Q10981 343 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 MYSM1Q5VVJ2 828 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 PRIMPOLQ96LW4 560 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 MAP3K14Q99558 947 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 RTEL1Q9NZ71 1219 aa21.4■■□□□ 1.02
TSPAN4-212ENST00000494815 AKAP17AQ02040 695 aaKnown RBP21.39■■□□□ 1.01
TSPAN4-212ENST00000494815 CDC42EP5Q6NZY7 148 aa21.39■■□□□ 1.01
TSPAN4-212ENST00000494815 KAT14Q9H8E8 782 aa21.39■■□□□ 1.01
TSPAN4-212ENST00000494815 ZNF646O15015 1829 aaPredicted RBP21.39■■□□□ 1.01
TSPAN4-212ENST00000494815 KIF28PB7ZC32 967 aa21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 U2AF2P26368 475 aaKnown RBP eCLIP21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 DNTTIP2Q5QJE6 756 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 TMTC3Q6ZXV5 915 aa21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 POLR3EQ9NVU0 708 aa21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 PRPF3O43395 683 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 ADCY5O95622 1261 aa21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 KIF5BP33176 963 aa21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 GUCY1A2P33402 732 aa21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 KIAA0825Q8IV33 1275 aa21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 PGBD1Q96JS3 809 aa21.38■■□□□ 1.01
TSPAN4-212ENST00000494815 PICALMQ13492 652 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 NOLC1Q14978 699 aaKnown RBP eCLIP21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 SOGA3Q5TF21 947 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 CMTR1Q8N1G2 835 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 CCDC82Q8N4S0 544 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 NEDD1Q8NHV4 660 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 SERPINA10Q9UK55 444 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 UBE2Q2LH0YL09 131 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 YEATS4O95619 227 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 MMP1P03956 469 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 TGFB2P61812 414 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 CEBPZQ03701 1054 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 SAFBQ15424 915 aaKnown RBP eCLIP21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 PNMA1Q8ND90 353 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 FTOQ9C0B1 505 aaKnown RBP eCLIP21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 VPS33BQ9H267 617 aa21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 DDX4Q9NQI0 724 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-212ENST00000494815 PLEKHA8P1O95397 391 aa21.36■■□□□ 1.01
TSPAN4-212ENST00000494815 GABPAQ06546 454 aa21.36■■□□□ 1.01
TSPAN4-212ENST00000494815 GNL2Q13823 731 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-212ENST00000494815 OSBPL5Q9H0X9 879 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-212ENST00000494815 XBP1P17861 261 aa21.36■■□□□ 1.01
TSPAN4-212ENST00000494815 TPRNQ4KMQ1 711 aa21.36■■□□□ 1.01
TSPAN4-212ENST00000494815 MTFR1LQ9H019 292 aa21.36■■□□□ 1.01
TSPAN4-212ENST00000494815 PLIN4Q96Q06 1357 aa21.35■■□□□ 1.01
TSPAN4-212ENST00000494815 MYO3BQ8WXR4 1341 aa21.35■■□□□ 1.01
TSPAN4-212ENST00000494815 POLD1P28340 1107 aa21.35■■□□□ 1.01
TSPAN4-212ENST00000494815 GTF2F1P35269 517 aaKnown RBP eCLIP21.35■■□□□ 1.01
TSPAN4-212ENST00000494815 SMAP1Q8IYB5 467 aaPredicted RBP21.35■■□□□ 1.01
TSPAN4-212ENST00000494815 ZNF830Q96NB3 372 aaPredicted RBP21.35■■□□□ 1.01
TSPAN4-212ENST00000494815 SWAP70Q9UH65 585 aa21.35■■□□□ 1.01
TSPAN4-212ENST00000494815 ADAMTSL1Q8N6G6 1762 aa21.35■■□□□ 1.01
TSPAN4-212ENST00000494815 YDJCA8MPS7 323 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 LINC00301Q8NCQ3 95 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 BICD2Q8TD16 824 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 KCNG4Q8TDN1 519 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 FOXP1Q9H334 677 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 SPTLC3Q9NUV7 552 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 CNTNAP5Q8WYK1 1306 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 NPM3O75607 178 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 ZBTB7AO95365 584 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 LIG1P18858 919 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 PKN1Q16512 942 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 DDX19AQ9NUU7 478 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 SERPINB13Q9UIV8 391 aa21.34■■□□□ 1.01
TSPAN4-212ENST00000494815 NOVP48745 357 aa21.33■■□□□ 1.01
TSPAN4-212ENST00000494815 GNAQP50148 359 aa21.33■■□□□ 1.01
TSPAN4-212ENST00000494815 IDI2Q9BXS1 227 aa21.33■■□□□ 1.01
TSPAN4-212ENST00000494815 PIM2Q9P1W9 311 aa21.33■■□□□ 1.01
TSPAN4-212ENST00000494815 STX8Q9UNK0 236 aa21.33■■□□□ 1.01
TSPAN4-212ENST00000494815 V9GY48 417 aaPredicted RBP21.33■■□□□ 1.01
TSPAN4-212ENST00000494815 HLA-DOAP06340 250 aa21.33■■□□□ 1
TSPAN4-212ENST00000494815 GRM4Q14833 912 aa21.33■■□□□ 1
TSPAN4-212ENST00000494815 ANO1Q5XXA6 986 aa21.33■■□□□ 1
TSPAN4-212ENST00000494815 NOSTRINQ8IVI9 506 aa21.33■■□□□ 1
TSPAN4-212ENST00000494815 DIS3L2Q8IYB7 885 aaKnown RBP21.33■■□□□ 1
TSPAN4-212ENST00000494815 SRBD1Q8N5C6 995 aaKnown RBP21.33■■□□□ 1
TSPAN4-212ENST00000494815 TMEM47Q9BQJ4 181 aa21.33■■□□□ 1
TSPAN4-212ENST00000494815 FUCA2Q9BTY2 467 aa21.33■■□□□ 1
TSPAN4-212ENST00000494815 CCDC94Q9BW85 323 aaPredicted RBP21.33■■□□□ 1
TSPAN4-212ENST00000494815 EHD4Q9H223 541 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms