RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PPIP5K2O43314 1243 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 BNIP3LO60238 219 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 HIF1AQ16665 826 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 AOC3Q16853 763 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 SAMD5Q5TGI4 173 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 DPP8Q6V1X1 898 aaPredicted RBP10.33□□□□□ -0.76
RIF1-211ENST00000494333 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 GPC2Q8N158 579 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 SUPT20HQ8NEM7 779 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 GTF3C2Q8WUA4 911 aaPredicted RBP10.33□□□□□ -0.76
RIF1-211ENST00000494333 CELF1Q92879 486 aaKnown RBP10.33□□□□□ -0.76
RIF1-211ENST00000494333 TAF1DQ9H5J8 278 aaPredicted RBP10.33□□□□□ -0.76
RIF1-211ENST00000494333 NDFIP2Q9NV92 336 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 CWC25Q9NXE8 425 aaPredicted RBP10.33□□□□□ -0.76
RIF1-211ENST00000494333 PCDHGC4Q9Y5F7 938 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 FANCIQ9NVI1 1328 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 CCDC88AQ3V6T2 1871 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 VAMP4O75379 141 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 PCCAP05165 728 aaPredicted RBP10.32□□□□□ -0.76
RIF1-211ENST00000494333 HSP90B1P14625 803 aaKnown RBP10.32□□□□□ -0.76
RIF1-211ENST00000494333 ARID4AP29374 1257 aaPredicted RBP10.32□□□□□ -0.76
RIF1-211ENST00000494333 EXOSC9Q06265 439 aaKnown RBP10.32□□□□□ -0.76
RIF1-211ENST00000494333 EAPPQ56P03 285 aaPredicted RBP10.32□□□□□ -0.76
RIF1-211ENST00000494333 G2E3Q7L622 706 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 TMC4Q7Z404 712 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 TRERF1Q96PN7 1200 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 RTFDC1Q9BY42 306 aaPredicted RBP10.32□□□□□ -0.76
RIF1-211ENST00000494333 VPS33BQ9H267 617 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 HACL1Q9UJ83 578 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 NSFL1CQ9UNZ2 370 aaKnown RBP10.32□□□□□ -0.76
RIF1-211ENST00000494333 MTMR7Q9Y216 660 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 CACNA1SQ13698 1873 aa10.32□□□□□ -0.76
RIF1-211ENST00000494333 TGFBR3LH3BV60 316 aa10.31□□□□□ -0.76
RIF1-211ENST00000494333 TNFRSF10BO14763 440 aa10.31□□□□□ -0.76
RIF1-211ENST00000494333 EPHX2P34913 555 aa10.31□□□□□ -0.76
RIF1-211ENST00000494333 RPS8P62241 208 aaKnown RBP10.31□□□□□ -0.76
RIF1-211ENST00000494333 NEXNQ0ZGT2 675 aa10.31□□□□□ -0.76
RIF1-211ENST00000494333 LCE2AQ5TA79 106 aaPredicted RBP10.31□□□□□ -0.76
RIF1-211ENST00000494333 IFT43Q96FT9 208 aa10.31□□□□□ -0.76
RIF1-211ENST00000494333 ABHD17AQ96GS6 310 aa10.31□□□□□ -0.76
RIF1-211ENST00000494333 CFHR5Q9BXR6 569 aa10.31□□□□□ -0.76
RIF1-211ENST00000494333 DMGDHQ9UI17 866 aaKnown RBP10.31□□□□□ -0.76
RIF1-211ENST00000494333 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
RIF1-211ENST00000494333 TIAM2Q8IVF5 1701 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 WDR90Q96KV7 1748 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 DCDC2BA2VCK2 349 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 PDE8AO60658 829 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 IGKV5-2P06315 115 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 TNP2Q05952 138 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 KIAA2012Q0VF49 1180 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 GAS6Q14393 721 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 CWF19L2Q2TBE0 894 aaKnown RBP10.3□□□□□ -0.76
RIF1-211ENST00000494333 IER5Q5VY09 327 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 BTLAQ7Z6A9 289 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 PNMA8AQ86V59 439 aaPredicted RBP10.3□□□□□ -0.76
RIF1-211ENST00000494333 LDHDQ86WU2 507 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 HOMEZQ8IX15 550 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 COL25A1Q9BXS0 654 aaPredicted RBP10.3□□□□□ -0.76
RIF1-211ENST00000494333 MYH16Q9H6N6 1097 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 SEC31BQ9NQW1 1179 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 ZNRF3Q9ULT6 936 aa10.3□□□□□ -0.76
RIF1-211ENST00000494333 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
RIF1-211ENST00000494333 KHNYNO15037 678 aaKnown RBP10.29□□□□□ -0.76
RIF1-211ENST00000494333 FAM157BP0CG42 384 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 MAPTP10636 758 aaKnown RBP10.29□□□□□ -0.76
RIF1-211ENST00000494333 BRD2P25440 801 aaKnown RBP10.29□□□□□ -0.76
RIF1-211ENST00000494333 EPS15P42566 896 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 CXCL9Q07325 125 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 CCDC152Q4G0S7 254 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 FAM26DQ5JW98 314 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 HELQQ8TDG4 1101 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 CEP63Q96MT8 703 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 HCN2Q9UL51 889 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 ATXN7L1Q9ULK2 861 aaPredicted RBP10.29□□□□□ -0.76
RIF1-211ENST00000494333 PHF24Q9UPV7 400 aa10.29□□□□□ -0.76
RIF1-211ENST00000494333 NEURL1BA8MQ27 555 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 EFSO43281 561 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 RAD17O75943 681 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 GMPRP36959 345 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 SERPINB4P48594 390 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 GPSM2P81274 684 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 TYRO3Q06418 890 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 MTMR3Q13615 1198 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 RNFT1Q5M7Z0 435 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 CIAPIN1Q6FI81 312 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 STIM2Q9P246 746 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 POLLQ9UGP5 575 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 DICER1Q9UPY3 1922 aaKnown RBP10.28□□□□□ -0.76
RIF1-211ENST00000494333 CDHR2Q9BYE9 1310 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 COL4A5P29400 1685 aa10.28□□□□□ -0.76
RIF1-211ENST00000494333 ANKRD36CQ5JPF3 1778 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 MICAL2O94851 1124 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 ABL1P00519 1130 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 KRT76Q01546 638 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 GCKRQ14397 625 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 TNIP1Q15025 636 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 MAP1SQ66K74 1059 aaPredicted RBP10.27□□□□□ -0.77
RIF1-211ENST00000494333 UBE3BQ7Z3V4 1068 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 TREML1Q86YW5 311 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 ETFBKMTQ8IXQ9 262 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms