RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 TNPO2O14787 897 aaKnown RBP10.32□□□□□ -0.76
LRCH3-219ENST00000494069 ELNP15502 786 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 SEPT2Q15019 361 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 RAB3GAP1Q15042 981 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 FAM110CQ1W6H9 321 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 RASEFQ8IZ41 740 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 OTUD7AQ8TE49 926 aaPredicted RBP10.32□□□□□ -0.76
LRCH3-219ENST00000494069 DYNLL2Q96FJ2 89 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 PUS7LQ9H0K6 701 aaKnown RBP10.32□□□□□ -0.76
LRCH3-219ENST00000494069 TXNRD2Q9NNW7 524 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 ECHDC1Q9NTX5 307 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 MGAMO43451 1857 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 DDX60LQ5H9U9 1706 aaKnown RBP10.31□□□□□ -0.76
LRCH3-219ENST00000494069 ADCY3O60266 1144 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 HOXA7P31268 230 aaPredicted RBP10.31□□□□□ -0.76
LRCH3-219ENST00000494069 IRX3P78415 501 aaPredicted RBP10.31□□□□□ -0.76
LRCH3-219ENST00000494069 PABPC4Q13310 644 aaKnown RBP eCLIP10.31□□□□□ -0.76
LRCH3-219ENST00000494069 UBE3CQ15386 1083 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 Q3C1V9 767 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 USP17L2Q6R6M4 530 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 SHISA4Q96DD7 197 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 FEZ1Q99689 392 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 GINM1Q9NU53 330 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 RBPJLQ9UBG7 517 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 BIN2Q9UBW5 565 aaPredicted RBP10.31□□□□□ -0.76
LRCH3-219ENST00000494069 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 DOCK3Q8IZD9 2030 aa10.31□□□□□ -0.76
LRCH3-219ENST00000494069 A0A1W2PRG0 241 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 CCL5P13501 91 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 GCLCP48506 637 aaPredicted RBP10.3□□□□□ -0.76
LRCH3-219ENST00000494069 HERVK_113P62684 666 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 CLEC10AQ8IUN9 316 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 OSBP2Q969R2 916 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.766e-7■■■□□ 14.7
LRCH3-219ENST00000494069 UNC93B1Q9H1C4 597 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 MORF4L1Q9UBU8 362 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 GJD2Q9UKL4 321 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 NAV1Q8NEY1 1877 aa10.3□□□□□ -0.76
LRCH3-219ENST00000494069 RBBP6Q7Z6E9 1792 aaKnown RBP10.29□□□□□ -0.76
LRCH3-219ENST00000494069 USP17L12C9JPN9 530 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 USP17L21D6R901 530 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 MPHOSPH10O00566 681 aaKnown RBP10.29□□□□□ -0.76
LRCH3-219ENST00000494069 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
LRCH3-219ENST00000494069 INHAP05111 366 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 AKR1B1P15121 316 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 TRIM32Q13049 653 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 IRF5Q13568 498 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 KIAA1755Q5JYT7 1200 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
LRCH3-219ENST00000494069 SIAH1Q8IUQ4 282 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 SLAIN1Q8ND83 568 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 C12orf42Q96LP6 360 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
LRCH3-219ENST00000494069 PAGR1Q9BTK6 254 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 KIAA1683Q9H0B3 1180 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 RNF208Q9H0X6 261 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 CABP5Q9NP86 173 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 ATP8A2Q9NTI2 1148 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
LRCH3-219ENST00000494069 SLC4A4Q9Y6R1 1079 aa10.29□□□□□ -0.76
LRCH3-219ENST00000494069 CNMDO75829 334 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 VCAM1P19320 739 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
LRCH3-219ENST00000494069 NUBP1P53384 320 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 CTR9Q6PD62 1173 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 CATSPERGQ6ZRH7 1159 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 STK11IPQ8N1F8 1099 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 KBTBD3Q8NAB2 608 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 GPRC5AQ8NFJ5 357 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 PI4K2BQ8TCG2 481 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 PXYLP1Q8TE99 480 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 COA7Q96BR5 231 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 PORCNQ9H237 461 aa10.28□□□□□ -0.76
LRCH3-219ENST00000494069 BAZ2AQ9UIF9 1905 aaKnown RBP10.28□□□□□ -0.76
LRCH3-219ENST00000494069 GSG1L2A8MUP6 293 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L15C9J2P7 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L13C9JLJ4 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L11C9JVI0 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L18D6R9N7 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L22D6RA61 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L17D6RBQ6 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L19D6RCP7 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L20D6RJB6 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 M0R2C6 588 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 RNF113AO15541 343 aaKnown RBP10.27□□□□□ -0.77
LRCH3-219ENST00000494069 GJB1P08034 283 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 CYP2B6P20813 491 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 GJA8P48165 433 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 CDK8P49336 464 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 ERVK-9P63128 1117 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 ERVK-24P63145 666 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 UBXN2AP68543 259 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 USP17L24Q0WX57 530 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 GPATCH3Q96I76 525 aa10.27□□□□□ -0.77
LRCH3-219ENST00000494069 SEC62Q99442 399 aaKnown RBP10.27□□□□□ -0.77
LRCH3-219ENST00000494069 RPAP3Q9H6T3 665 aaPredicted RBP10.27□□□□□ -0.77
LRCH3-219ENST00000494069 BTBD7Q9P203 1132 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms