RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 UNC93B1Q9H1C4 597 aa16.19■□□□□ 0.18
CTDSP1-212ENST00000494067 DCTPP1Q9H773 170 aa16.19■□□□□ 0.18
CTDSP1-212ENST00000494067 MORF4L1Q9UBU8 362 aa16.19■□□□□ 0.18
CTDSP1-212ENST00000494067 PARP14Q460N5 1801 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 RAB3GAP1Q15042 981 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 ABCB5Q2M3G0 1257 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 Q3C1V9 767 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 AMOTL1Q8IY63 956 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 GPRC5AQ8NFJ5 357 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 DYNLL2Q96FJ2 89 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 DDRGK1Q96HY6 314 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 CWC22Q9HCG8 908 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 MCM9Q9NXL9 1143 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 RBPJLQ9UBG7 517 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 GJD2Q9UKL4 321 aa16.18■□□□□ 0.18
CTDSP1-212ENST00000494067 A0A0G2JMZ2 1700 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 A0A1W2PRG0 241 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 CNMDO75829 334 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 INHAP05111 366 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 HERVK_113P62684 666 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 TRIM32Q13049 653 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 SEPT2Q15019 361 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 UBE2Q1Q7Z7E8 422 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 U2AF1L4Q8WU68 220 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 DPF3Q92784 378 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 C12orf42Q96LP6 360 aa16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 PUS7LQ9H0K6 701 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-212ENST00000494067 GREB1LQ9C091 1923 aaPredicted RBP16.16■□□□□ 0.18
CTDSP1-212ENST00000494067 SGPL1O95470 568 aa16.16■□□□□ 0.18
CTDSP1-212ENST00000494067 TFRCP02786 760 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-212ENST00000494067 RRP1P56182 461 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-212ENST00000494067 ZSCAN25Q6NSZ9 544 aa16.16■□□□□ 0.18
CTDSP1-212ENST00000494067 PORCNQ9H237 461 aa16.16■□□□□ 0.18
CTDSP1-212ENST00000494067 ALPK3Q96L96 1907 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L15C9J2P7 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L13C9JLJ4 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L11C9JVI0 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 VCAM1P19320 739 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 MAPK4P31152 587 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 SIAH1Q8IUQ4 282 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 KIAA1683Q9H0B3 1180 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 ECHDC1Q9NTX5 307 aa16.15■□□□□ 0.18
CTDSP1-212ENST00000494067 MPHOSPH10O00566 681 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 HMGCRP04035 888 aa16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 CCNA1P78396 465 aa16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 UBE3CQ15386 1083 aa16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 TRMT44Q8IYL2 757 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 SOCS4Q8WXH5 440 aa16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 GPATCH3Q96I76 525 aa16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 PAGR1Q9BTK6 254 aa16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
CTDSP1-212ENST00000494067 GLRX3O76003 335 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 FARP2O94887 1054 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 AKR1B1P15121 316 aa16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 ERVK-24P63145 666 aa16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 C12orf60Q5U649 245 aa16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 OSBP2Q969R2 916 aa16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 DEFB118Q96PH6 123 aa16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 HMX1Q9NP08 348 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 ATP8A2Q9NTI2 1148 aa16.13■□□□□ 0.17
CTDSP1-212ENST00000494067 USP17L12C9JPN9 530 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 USP17L21D6R901 530 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 CYP2B6P20813 491 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 HABP4Q5JVS0 413 aaKnown RBP16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 CATSPERGQ6ZRH7 1159 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 TRIB2Q92519 343 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.12■□□□□ 0.173e-7■■□□□ 11.8
CTDSP1-212ENST00000494067 PAK6Q9NQU5 681 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 BTBD7Q9P203 1132 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 RABGAP1Q9Y3P9 1069 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 NR2E3Q9Y5X4 410 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 SALL3Q9BXA9 1300 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
CTDSP1-212ENST00000494067 COL11A1P12107 1806 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 CDK8P49336 464 aa16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 TMEM179Q6ZVK1 233 aa16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 KBTBD3Q8NAB2 608 aa16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 USP6NLQ92738 828 aa16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 STRBPQ96SI9 672 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 EPB41L4AQ9HCS5 686 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 PCDH10Q9P2E7 1040 aa16.11■□□□□ 0.17
CTDSP1-212ENST00000494067 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms