RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 GJB1P08034 283 aa11.77□□□□□ -0.53
UFD1-210ENST00000494054 UBXN2AP68543 259 aa11.77□□□□□ -0.53
UFD1-210ENST00000494054 GPRC5AQ8NFJ5 357 aa11.77□□□□□ -0.53
UFD1-210ENST00000494054 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.53
UFD1-210ENST00000494054 FEZ1Q99689 392 aa11.77□□□□□ -0.53
UFD1-210ENST00000494054 KIAA1683Q9H0B3 1180 aa11.77□□□□□ -0.53
UFD1-210ENST00000494054 RNF208Q9H0X6 261 aa11.77□□□□□ -0.53
UFD1-210ENST00000494054 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L15C9J2P7 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L13C9JLJ4 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L12C9JPN9 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L11C9JVI0 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L21D6R901 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L18D6R9N7 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L22D6RA61 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L17D6RBQ6 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L19D6RCP7 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L20D6RJB6 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 MPHOSPH10O00566 681 aaKnown RBP11.76□□□□□ -0.53
UFD1-210ENST00000494054 GJA8P48165 433 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 USP17L24Q0WX57 530 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 ZSCAN25Q6NSZ9 544 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 CATSPERGQ6ZRH7 1159 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 KBTBD3Q8NAB2 608 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 YTHDC1Q96MU7 727 aaKnown RBP11.76□□□□□ -0.53
UFD1-210ENST00000494054 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 PAGR1Q9BTK6 254 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 PORCNQ9H237 461 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 ATP8A2Q9NTI2 1148 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 SLC4A4Q9Y6R1 1079 aa11.76□□□□□ -0.53
UFD1-210ENST00000494054 BRCA2P51587 3418 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 CNMDO75829 334 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 AKR1B1P15121 316 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 VCAM1P19320 739 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 USP14P54578 494 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 ERVK-9P63128 1117 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 ERVK-24P63145 666 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 TRIM32Q13049 653 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 KIAA1755Q5JYT7 1200 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 CLEC10AQ8IUN9 316 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 SIAH1Q8IUQ4 282 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 U2AF1L4Q8WU68 220 aaKnown RBP11.75□□□□□ -0.53
UFD1-210ENST00000494054 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 STRBPQ96SI9 672 aaKnown RBP11.75□□□□□ -0.53
UFD1-210ENST00000494054 SWAP70Q9UH65 585 aa11.75□□□□□ -0.53
UFD1-210ENST00000494054 PLXNB2O15031 1838 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 BAZ2AQ9UIF9 1905 aaKnown RBP11.74□□□□□ -0.53
UFD1-210ENST00000494054 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
UFD1-210ENST00000494054 SGPL1O95470 568 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 CYP2B6P20813 491 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 CDK8P49336 464 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 CTR9Q6PD62 1173 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 TMEM179Q6ZVK1 233 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 UBE2Q1Q7Z7E8 422 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 NKX2-3Q8TAU0 364 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 PI4K2BQ8TCG2 481 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 DEFB118Q96PH6 123 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 RPAP3Q9H6T3 665 aaPredicted RBP11.74□□□□□ -0.53
UFD1-210ENST00000494054 MYH7P12883 1935 aa11.74□□□□□ -0.53
UFD1-210ENST00000494054 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
UFD1-210ENST00000494054 MAPK4P31152 587 aa11.73□□□□□ -0.53
UFD1-210ENST00000494054 C16orf86Q6ZW13 317 aa11.73□□□□□ -0.53
UFD1-210ENST00000494054 GTF3C2Q8WUA4 911 aaPredicted RBP11.73□□□□□ -0.53
UFD1-210ENST00000494054 USP6NLQ92738 828 aa11.73□□□□□ -0.53
UFD1-210ENST00000494054 GPATCH3Q96I76 525 aa11.73□□□□□ -0.53
UFD1-210ENST00000494054 PAK6Q9NQU5 681 aaPredicted RBP11.73□□□□□ -0.53
UFD1-210ENST00000494054 BTBD7Q9P203 1132 aa11.73□□□□□ -0.53
UFD1-210ENST00000494054 RABGAP1Q9Y3P9 1069 aa11.73□□□□□ -0.53
UFD1-210ENST00000494054 TTC41PQ6P2S7 1318 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
UFD1-210ENST00000494054 M0R2C6 588 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 HMGCRP04035 888 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 MORN1Q5T089 497 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 LBX2Q6XYB7 198 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 GPR142Q7Z601 462 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 PLEKHH3Q7Z736 793 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 TRIB2Q92519 343 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 APPBP2Q92624 585 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.72□□□□□ -0.53
UFD1-210ENST00000494054 EPB41L4AQ9HCS5 686 aaPredicted RBP11.72□□□□□ -0.53
UFD1-210ENST00000494054 TMX2Q9Y320 296 aa11.72□□□□□ -0.53
UFD1-210ENST00000494054 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 GPAA1O43292 621 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 TFRCP02786 760 aaKnown RBP11.71□□□□□ -0.53
UFD1-210ENST00000494054 ICA1Q05084 483 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 COG2Q14746 738 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 CCL14Q16627 93 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 SBK1Q52WX2 424 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 CCAR1Q8IX12 1150 aaKnown RBP11.71□□□□□ -0.53
UFD1-210ENST00000494054 AMOTL1Q8IY63 956 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 STK11IPQ8N1F8 1099 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 CCDC17Q96LX7 622 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 SEC62Q99442 399 aaKnown RBP11.71□□□□□ -0.53
UFD1-210ENST00000494054 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
UFD1-210ENST00000494054 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
UFD1-210ENST00000494054 ARPP21Q9UBL0 812 aaPredicted RBP11.71□□□□□ -0.53
UFD1-210ENST00000494054 RPTORQ8N122 1335 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms