RNA–Protein interactions for RNA: ENST00000493934.1

SLF1-205, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 3

Gene SLF1, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-205ENST00000493934 NAALADL2Q58DX5 795 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 TBCELQ5QJ74 424 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 C16orf46Q6P387 395 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 NFXL1Q6ZNB6 911 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.87□□□□□ -1.79
SLF1-205ENST00000493934 COL23A1Q86Y22 540 aaPredicted RBP3.87□□□□□ -1.79
SLF1-205ENST00000493934 SMC1BQ8NDV3 1235 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 L3MBTL2Q969R5 705 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 SMG9Q9H0W8 520 aaKnown RBP3.87□□□□□ -1.79
SLF1-205ENST00000493934 CCDC87Q9NVE4 849 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 CLTCL1P53675 1640 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 ALS2Q96Q42 1657 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 CPDO75976 1380 aa3.87□□□□□ -1.79
SLF1-205ENST00000493934 TRPM3Q9HCF6 1732 aaPredicted RBP3.87□□□□□ -1.79
SLF1-205ENST00000493934 CYP26A1O43174 497 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 TREHO43280 583 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 EIF2AK2P19525 551 aaKnown RBP3.86□□□□□ -1.79
SLF1-205ENST00000493934 EIF1AXP47813 144 aaKnown RBP3.86□□□□□ -1.79
SLF1-205ENST00000493934 EPHA4P54764 986 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 MRPL58Q14197 206 aaKnown RBP3.86□□□□□ -1.79
SLF1-205ENST00000493934 C9orf131Q5VYM1 1079 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 ARHGAP27Q6ZUM4 889 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 SLC9A9Q8IVB4 645 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 FBXL6Q8N531 539 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 NUDT16Q96DE0 195 aaKnown RBP3.86□□□□□ -1.79
SLF1-205ENST00000493934 ABHD8Q96I13 439 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 HSH2DQ96JZ2 352 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 FAM161BQ96MY7 647 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 SLC4A9Q96Q91 983 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 CARD10Q9BWT7 1032 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 BACH2Q9BYV9 841 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 MRS2Q9HD23 443 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.86□□□□□ -1.79
SLF1-205ENST00000493934 FAM53CQ9NYF3 392 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 USP3Q9Y6I4 520 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 IGSF1Q8N6C5 1336 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 PRR36Q9H6K5 1346 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 ARHGEF28Q8N1W1 1705 aaKnown RBP3.86□□□□□ -1.79
SLF1-205ENST00000493934 BRD4O60885 1362 aaPredicted RBP3.86□□□□□ -1.79
SLF1-205ENST00000493934 ROCK1Q13464 1354 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 USP6P35125 1406 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 TNS2Q63HR2 1409 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 VPS8Q8N3P4 1428 aa3.86□□□□□ -1.79
SLF1-205ENST00000493934 COL24A1Q17RW2 1714 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 CCDC85CA6NKD9 419 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 TNFRSF10BO14763 440 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 SCAMP3O14828 347 aaKnown RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 FOXN1O15353 648 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 SUV39H1O43463 412 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 GAS2O43903 313 aaKnown RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 FZD6O60353 706 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 LDHBP07195 334 aaKnown RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 HMGB2P26583 209 aaKnown RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 ITGAEP38570 1179 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 CTCFP49711 727 aaPredicted RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 HDLBPQ00341 1268 aaKnown RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 PLCB3Q01970 1234 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 EHHADHQ08426 723 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 COX20Q5RI15 118 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 ALKBH2Q6NS38 261 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 FAM177A1Q8N128 213 aaPredicted RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 TMEM87AQ8NBN3 555 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 FLAD1Q8NFF5 587 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 DUSP9Q99956 384 aaKnown RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 MUC3BQ9H195 1237 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 RNF19AQ9NV58 838 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 PARP2Q9UGN5 583 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 USP19O94966 1318 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 WDR17Q8IZU2 1322 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 KDM2BQ8NHM5 1336 aa3.85□□□□□ -1.79
SLF1-205ENST00000493934 EIF3AQ14152 1382 aaKnown RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 COL5A2P05997 1499 aaPredicted RBP3.85□□□□□ -1.79
SLF1-205ENST00000493934 PHRF1Q9P1Y6 1649 aaKnown RBP3.84□□□□□ -1.79
SLF1-205ENST00000493934 IFT172Q9UG01 1749 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 GPR182O15218 404 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 PRPF40AO75400 957 aaKnown RBP3.84□□□□□ -1.79
SLF1-205ENST00000493934 HMGB1P09429 215 aaKnown RBP3.84□□□□□ -1.79
SLF1-205ENST00000493934 NOS2P35228 1153 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 PSMA6P60900 246 aaKnown RBP3.84□□□□□ -1.79
SLF1-205ENST00000493934 ATP2B2Q01814 1243 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 CCINQ13939 588 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 DSC3Q14574 896 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 SETDB1Q15047 1291 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 SF3A1Q15459 793 aaKnown RBP3.84□□□□□ -1.79
SLF1-205ENST00000493934 TEAD4Q15561 434 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 HIF1AQ16665 826 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 GDF6Q6KF10 455 aaPredicted RBP3.84□□□□□ -1.79
SLF1-205ENST00000493934 IL22RA1Q8N6P7 574 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 DMRTB1Q96MA1 342 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 CITED4Q96RK1 184 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 SETDB2Q96T68 719 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 C2orf49Q9BVC5 232 aaPredicted RBP3.84□□□□□ -1.79
SLF1-205ENST00000493934 RC3H2Q9HBD1 1191 aaKnown RBP3.84□□□□□ -1.79
SLF1-205ENST00000493934 STIM2Q9P246 746 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 VTI1BQ9UEU0 232 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 TRAK1Q9UPV9 953 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 BCS1LQ9Y276 419 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 CHMP3Q9Y3E7 222 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 ACEP12821 1306 aa3.84□□□□□ -1.79
SLF1-205ENST00000493934 CRYBG1Q9Y4K1 1723 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms