RNA–Protein interactions for RNA: ENST00000493934.1

SLF1-205, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 3

Gene SLF1, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-205ENST00000493934 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
SLF1-205ENST00000493934 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
SLF1-205ENST00000493934 SENP3Q9H4L4 574 aaPredicted RBP14.31□□□□□ -0.12
SLF1-205ENST00000493934 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
SLF1-205ENST00000493934 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
SLF1-205ENST00000493934 FOXD1Q16676 465 aa13.29□□□□□ -0.28
SLF1-205ENST00000493934 MSH5O43196 834 aa12.89□□□□□ -0.35
SLF1-205ENST00000493934 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
SLF1-205ENST00000493934 PPP6R1Q9UPN7 881 aa11.75□□□□□ -0.53
SLF1-205ENST00000493934 ADRA2BP18089 450 aa11.74□□□□□ -0.53
SLF1-205ENST00000493934 PLPPR3Q6T4P5 718 aa11.68□□□□□ -0.54
SLF1-205ENST00000493934 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
SLF1-205ENST00000493934 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
SLF1-205ENST00000493934 MAPK8IP2Q13387 824 aaPredicted RBP10.97□□□□□ -0.65
SLF1-205ENST00000493934 SCAF1Q9H7N4 1312 aaKnown RBP10.95□□□□□ -0.66
SLF1-205ENST00000493934 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
SLF1-205ENST00000493934 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
SLF1-205ENST00000493934 C1QBPQ07021 282 aaKnown RBP10.69□□□□□ -0.7
SLF1-205ENST00000493934 POTEHQ6S545 545 aa10.67□□□□□ -0.7
SLF1-205ENST00000493934 HOXD11P31277 338 aaPredicted RBP10.43□□□□□ -0.74
SLF1-205ENST00000493934 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
SLF1-205ENST00000493934 RNF216Q9NWF9 866 aaPredicted RBP10.2□□□□□ -0.78
SLF1-205ENST00000493934 CNKSR2Q8WXI2 1034 aa10.11□□□□□ -0.79
SLF1-205ENST00000493934 PPP4R3CPQ6ZMV5 832 aa10.08□□□□□ -0.8
SLF1-205ENST00000493934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.05□□□□□ -0.8
SLF1-205ENST00000493934 DSG3P32926 999 aa9.88□□□□□ -0.83
SLF1-205ENST00000493934 CAPN15O75808 1086 aa9.86□□□□□ -0.83
SLF1-205ENST00000493934 SPINK5Q9NQ38 1064 aaPredicted RBP9.71□□□□□ -0.86
SLF1-205ENST00000493934 SP7Q8TDD2 431 aaPredicted RBP9.67□□□□□ -0.86
SLF1-205ENST00000493934 U3KPZ7 1027 aaPredicted RBP9.64□□□□□ -0.87
SLF1-205ENST00000493934 RBM42Q9BTD8 480 aaKnown RBP9.62□□□□□ -0.87
SLF1-205ENST00000493934 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
SLF1-205ENST00000493934 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
SLF1-205ENST00000493934 APLP2Q06481 763 aa9.54□□□□□ -0.88
SLF1-205ENST00000493934 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
SLF1-205ENST00000493934 ABCB7O75027 752 aa9.5□□□□□ -0.89
SLF1-205ENST00000493934 TRHP20396 242 aaPredicted RBP9.5□□□□□ -0.89
SLF1-205ENST00000493934 NPM3O75607 178 aaKnown RBP9.3□□□□□ -0.92
SLF1-205ENST00000493934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.29□□□□□ -0.92
SLF1-205ENST00000493934 HNRNPUL2Q1KMD3 747 aaKnown RBP9.29□□□□□ -0.92
SLF1-205ENST00000493934 HAX1O00165 279 aa9.28□□□□□ -0.92
SLF1-205ENST00000493934 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
SLF1-205ENST00000493934 SAMD1Q6SPF0 538 aaPredicted RBP9.16□□□□□ -0.94
SLF1-205ENST00000493934 PIP4P2Q8N4L2 257 aa9.16□□□□□ -0.94
SLF1-205ENST00000493934 AKT1S1Q96B36 256 aa9.14□□□□□ -0.95
SLF1-205ENST00000493934 LHX8Q68G74 356 aa9.04□□□□□ -0.96
SLF1-205ENST00000493934 SLC4A2P04920 1241 aa9.01□□□□□ -0.97
SLF1-205ENST00000493934 POLA2Q14181 598 aa9.01□□□□□ -0.97
SLF1-205ENST00000493934 REM2Q8IYK8 340 aaPredicted RBP9.01□□□□□ -0.97
SLF1-205ENST00000493934 FXR2P51116 673 aaKnown RBP eCLIP8.97□□□□□ -0.97
SLF1-205ENST00000493934 PITPNM1O00562 1244 aa8.93□□□□□ -0.98
SLF1-205ENST00000493934 ZBTB12Q9Y330 459 aaPredicted RBP8.93□□□□□ -0.98
SLF1-205ENST00000493934 EVX2Q03828 476 aa8.9□□□□□ -0.98
SLF1-205ENST00000493934 OSCARQ8IYS5 282 aa8.79□□□□□ -1
SLF1-205ENST00000493934 GABBR2O75899 941 aa8.78□□□□□ -1
SLF1-205ENST00000493934 MYCNP04198 464 aaPredicted RBP8.73□□□□□ -1.01
SLF1-205ENST00000493934 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
SLF1-205ENST00000493934 C19orf67A6NJJ6 358 aa8.72□□□□□ -1.01
SLF1-205ENST00000493934 POTEMA6NI47 508 aa8.58□□□□□ -1.04
SLF1-205ENST00000493934 CLEC11AQ9Y240 323 aa8.58□□□□□ -1.04
SLF1-205ENST00000493934 SPDYE1Q8NFV5 336 aaPredicted RBP8.57□□□□□ -1.04
SLF1-205ENST00000493934 PCDH10Q9P2E7 1040 aa8.53□□□□□ -1.04
SLF1-205ENST00000493934 CLCN6P51797 869 aa8.52□□□□□ -1.05
SLF1-205ENST00000493934 SPDYE2BA6NHP3 402 aa8.51□□□□□ -1.05
SLF1-205ENST00000493934 SPDYE6P0CI01 402 aa8.51□□□□□ -1.05
SLF1-205ENST00000493934 SPDYE2Q495Y8 402 aa8.51□□□□□ -1.05
SLF1-205ENST00000493934 POTEGQ6S5H5 508 aa8.51□□□□□ -1.05
SLF1-205ENST00000493934 DCBLD2Q96PD2 775 aa8.51□□□□□ -1.05
SLF1-205ENST00000493934 POTEIP0CG38 1075 aa8.49□□□□□ -1.05
SLF1-205ENST00000493934 CD44P16070 742 aaKnown RBP8.43□□□□□ -1.06
SLF1-205ENST00000493934 KCNA4P22459 653 aa8.42□□□□□ -1.06
SLF1-205ENST00000493934 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
SLF1-205ENST00000493934 ATF5Q9Y2D1 282 aaPredicted RBP8.39□□□□□ -1.07
SLF1-205ENST00000493934 OTUD5Q96G74 571 aa8.38□□□□□ -1.07
SLF1-205ENST00000493934 FBLN2P98095 1184 aa8.37□□□□□ -1.07
SLF1-205ENST00000493934 PRR29P0C7W0 189 aa8.33□□□□□ -1.08
SLF1-205ENST00000493934 ZNF692Q9BU19 519 aaPredicted RBP8.27□□□□□ -1.09
SLF1-205ENST00000493934 ZNF579Q8NAF0 562 aaKnown RBP8.24□□□□□ -1.09
SLF1-205ENST00000493934 SSUH2Q9Y2M2 353 aa8.24□□□□□ -1.09
SLF1-205ENST00000493934 FARP1Q9Y4F1 1045 aaPredicted RBP8.24□□□□□ -1.09
SLF1-205ENST00000493934 FOXD4L1Q9NU39 408 aa8.2□□□□□ -1.1
SLF1-205ENST00000493934 POTEB2H3BUK9 544 aa8.19□□□□□ -1.1
SLF1-205ENST00000493934 MAMSTRQ6ZN01 415 aa8.18□□□□□ -1.1
SLF1-205ENST00000493934 ZRANB1Q9UGI0 708 aa8.18□□□□□ -1.1
SLF1-205ENST00000493934 GALR2O43603 387 aaPredicted RBP8.14□□□□□ -1.11
SLF1-205ENST00000493934 FAM163AQ96GL9 167 aaPredicted RBP8.13□□□□□ -1.11
SLF1-205ENST00000493934 PABPN1Q86U42 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
SLF1-205ENST00000493934 SCUBE2Q9NQ36 999 aa8.1□□□□□ -1.11
SLF1-205ENST00000493934 PAK3O75914 559 aaPredicted RBP8.09□□□□□ -1.11
SLF1-205ENST00000493934 METRNQ9UJH8 293 aa8.07□□□□□ -1.12
SLF1-205ENST00000493934 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
SLF1-205ENST00000493934 CDAN1Q8IWY9 1227 aa8.05□□□□□ -1.12
SLF1-205ENST00000493934 SLC39A7Q92504 469 aa8.04□□□□□ -1.12
SLF1-205ENST00000493934 ATXN8OSP0DMR3 200 aa8.02□□□□□ -1.13
SLF1-205ENST00000493934 C7P10643 843 aa8.02□□□□□ -1.13
SLF1-205ENST00000493934 MKRN4PQ13434 485 aaPredicted RBP7.98□□□□□ -1.13
SLF1-205ENST00000493934 PELP1Q8IZL8 1130 aaKnown RBP7.97□□□□□ -1.13
SLF1-205ENST00000493934 PHF12Q96QT6 1004 aa7.95□□□□□ -1.14
SLF1-205ENST00000493934 POTEJP0CG39 1038 aa7.93□□□□□ -1.14
SLF1-205ENST00000493934 ASTLQ6HA08 431 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms