RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 GALNT6Q8NCL4 622 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 CAMKK2Q96RR4 588 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 STK31Q9BXU1 1019 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 CHPF2Q9P2E5 772 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 TNNQ9UQP3 1299 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
TRA2B-216ENST00000493864 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 ELOA3DA6NLF2 546 aaPredicted RBP8.32□□□□□ -1.08
TRA2B-216ENST00000493864 ADARB2-AS1A8MUL3 147 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 ZBTB42B2RXF5 422 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 EREGO14944 169 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 BCRP11274 1271 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
TRA2B-216ENST00000493864 SOX18P35713 384 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 MAPK8P45983 427 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 PIP4K2AP48426 406 aaPredicted RBP8.32□□□□□ -1.08
TRA2B-216ENST00000493864 NRLP54845 237 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 SIK1P57059 783 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 ITPK1Q13572 414 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 PROSER3Q2NL68 480 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 ELOA3BQ3SY89 546 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 C20orf194Q5TEA3 1177 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 ELOA3Q8NG57 546 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 TRPM4Q8TD43 1214 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 EDARADDQ8WWZ3 215 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 TEX13AQ9BXU3 409 aaPredicted RBP8.32□□□□□ -1.08
TRA2B-216ENST00000493864 CHMP4AQ9BY43 222 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 PHAXQ9H814 394 aaKnown RBP8.32□□□□□ -1.08
TRA2B-216ENST00000493864 ZFYVE28Q9HCC9 887 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 SLC6A14Q9UN76 642 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.32□□□□□ -1.08
TRA2B-216ENST00000493864 PALLDQ8WX93 1383 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 PAPPAQ13219 1627 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 LY75O60449 1722 aa8.32□□□□□ -1.08
TRA2B-216ENST00000493864 UBR2Q8IWV8 1755 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 J3QW42 95 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 EIF1AYO14602 144 aaKnown RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 IPO8O15397 1037 aaKnown RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 WIPF1O43516 503 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 CPNE3O75131 537 aaKnown RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 POLR3DP05423 398 aaPredicted RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 P4HBP07237 508 aaKnown RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 CELA2BP08218 269 aaPredicted RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 EPXP11678 715 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 MYL6BP14649 208 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 ALAS2P22557 587 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 CANXP27824 592 aaKnown RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 GPLD1P80108 840 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 HYAL2Q12891 473 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 R3HDM1Q15032 1099 aaKnown RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 PCSK7Q16549 785 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 COL13A1Q5TAT6 717 aaPredicted RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 ZKSCAN2Q63HK3 967 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 NPAS4Q8IUM7 802 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 PMEPA1Q969W9 287 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 CSRNP1Q96S65 589 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 DDX21Q9NR30 783 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 DBF4Q9UBU7 674 aaPredicted RBP8.31□□□□□ -1.08
TRA2B-216ENST00000493864 TAF1LQ8IZX4 1826 aa8.31□□□□□ -1.08
TRA2B-216ENST00000493864 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 OIP5O43482 229 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 STARD3NLO95772 234 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 RLBP1P12271 317 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 CPB1P15086 417 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 ERCC3P19447 782 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 MAP3K10Q02779 954 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 FMR1Q06787 632 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRA2B-216ENST00000493864 FAM35AQ86V20 835 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 SVOPQ8N4V2 548 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 PANK1Q8TE04 598 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 MDFIQ99750 246 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 HYPKQ9NX55 129 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 C5P01031 1676 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 CASZ1Q86V15 1759 aa8.3□□□□□ -1.08
TRA2B-216ENST00000493864 KIF16BQ96L93 1317 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 TRIM27P14373 513 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
TRA2B-216ENST00000493864 AIMP1Q12904 312 aaKnown RBP8.29□□□□□ -1.08
TRA2B-216ENST00000493864 PDE3AQ14432 1141 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 ZNF385CQ66K41 422 aaPredicted RBP8.29□□□□□ -1.08
TRA2B-216ENST00000493864 INTS5Q6P9B9 1019 aaKnown RBP8.29□□□□□ -1.08
TRA2B-216ENST00000493864 ATF7IPQ6VMQ6 1270 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 COPS6Q7L5N1 327 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 LRP10Q7Z4F1 713 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 LINC00116Q8NCU8 138 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 XAGE3Q8WTP9 111 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 ARHGAP45Q92619 1136 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 DNAJC25Q9H1X3 360 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 LRRC4BQ9NT99 713 aa8.29□□□□□ -1.08
TRA2B-216ENST00000493864 CCNL1Q9UK58 526 aaPredicted RBP8.29□□□□□ -1.08
TRA2B-216ENST00000493864 SHISA8B8ZZ34 492 aa8.28□□□□□ -1.08
TRA2B-216ENST00000493864 F6X3S4 739 aa8.28□□□□□ -1.08
TRA2B-216ENST00000493864 GHRHP01286 108 aa8.28□□□□□ -1.08
TRA2B-216ENST00000493864 HOXD8P13378 290 aaPredicted RBP8.28□□□□□ -1.08
TRA2B-216ENST00000493864 AMPD1P23109 780 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 259.1 ms