RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 CAP2P40123 477 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 PLCD1P51178 756 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 ANAPC15P60006 121 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 CTDSPL2Q05D32 466 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 TMED8Q6PL24 325 aaPredicted RBP10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 ANKRD23Q86SG2 305 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 CD99L2Q8TCZ2 262 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 TGFBRAP1Q8WUH2 860 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 ANAPC4Q9UJX5 808 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
TM4SF1-203ENST00000493298 COL11A1P12107 1806 aaPredicted RBP10.77□□□□□ -0.68
TM4SF1-203ENST00000493298 USP17L12C9JPN9 530 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 USP17L21D6R901 530 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 BCRP11274 1271 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 GABPAQ06546 454 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 TAF1CQ15572 869 aaPredicted RBP10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 SBK1Q52WX2 424 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 FBXO46Q6PJ61 603 aaPredicted RBP10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 CYB5R4Q7L1T6 521 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 MAPKAPK5Q8IW41 473 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 TCEANC2Q96MN5 208 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 TBC1D2Q9BYX2 928 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 UPF3BQ9BZI7 483 aaKnown RBP10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 TM6SF1Q9BZW5 370 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 NEDD4P46934 1319 aa10.77□□□□□ -0.69
TM4SF1-203ENST00000493298 LAMA3Q16787 3333 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 PDHXO00330 501 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 SLC4A3P48751 1232 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 SP3Q02447 781 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 TOB2Q14106 344 aaPredicted RBP10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 PKN2Q16513 984 aaKnown RBP10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 LRRFIP1Q32MZ4 808 aaKnown RBP10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 TREML2Q5T2D2 321 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 TATDN1Q6P1N9 297 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 GIMAP6Q6P9H5 292 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 KIAA1211Q6ZU35 1233 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 DYNLL2Q96FJ2 89 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 DHX36Q9H2U1 1008 aaKnown RBP10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 PI4KBQ9UBF8 816 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 HERC5Q9UII4 1024 aaKnown RBP10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 PTPN22Q9Y2R2 807 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
TM4SF1-203ENST00000493298 CCDC85CA6NKD9 419 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 DTNBO60941 627 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 LARGE1O95461 756 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 CYP2C8P10632 490 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 PLCG2P16885 1265 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 GUCY1A2P33402 732 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 SHMT1P34896 483 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 LACTBP83111 547 aaPredicted RBP10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 PPARAQ07869 468 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 SH3D19Q5HYK7 790 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 RUFY3Q7L099 469 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 ZSCAN29Q8IWY8 852 aaPredicted RBP10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 SLC44A5Q8NCS7 719 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 SNX21Q969T3 373 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 AGXT2Q9BYV1 514 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 EHD4Q9H223 541 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 ATP8A2Q9NTI2 1148 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 SAP30BPQ9UHR5 308 aaKnown RBP10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 SLC45A1Q9Y2W3 748 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 ALPK3Q96L96 1907 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 ZNFX1Q9P2E3 1918 aaKnown RBP10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 SZT2Q5T011 3432 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 ROBO3Q96MS0 1386 aa10.75□□□□□ -0.69
TM4SF1-203ENST00000493298 FRMPD3Q5JV73 1810 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 BAG3O95817 575 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 GNAT2P19087 354 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 RPS6KB1P23443 525 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 SLC4A8Q2Y0W8 1093 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 OTUD7BQ6GQQ9 843 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 CHST3Q7LGC8 479 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 STAG1Q8WVM7 1258 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 ARMC5Q96C12 935 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 TRIM47Q96LD4 638 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 JAKMIP1Q96N16 626 aaKnown RBP10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 WDR18Q9BV38 432 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 CRNKL1Q9BZJ0 848 aaKnown RBP10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 ALDH8A1Q9H2A2 487 aaPredicted RBP10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 ZFYVE28Q9HCC9 887 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 TRIM17Q9Y577 477 aa10.74□□□□□ -0.69
TM4SF1-203ENST00000493298 TRIM75PA6NK02 468 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 APPP05067 770 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 AK2P54819 239 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 RABEP1Q15276 862 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 FOXP4Q8IVH2 680 aaPredicted RBP10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 STK11IPQ8N1F8 1099 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 ZNF280CQ8ND82 737 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 ERO1AQ96HE7 468 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 LRRC2Q9BYS8 371 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 ZSWIM5Q9P217 1185 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 CPA4Q9UI42 421 aa10.73□□□□□ -0.69
TM4SF1-203ENST00000493298 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms