RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 FARP2O94887 1054 aaPredicted RBP26.79■■□□□ 1.88
LYSMD4-208ENST00000493256 HMGCRP04035 888 aa26.79■■□□□ 1.88
LYSMD4-208ENST00000493256 GUCY1A2P33402 732 aa26.79■■□□□ 1.88
LYSMD4-208ENST00000493256 Q3C1V9 767 aa26.79■■□□□ 1.88
LYSMD4-208ENST00000493256 GTF3C2Q8WUA4 911 aaPredicted RBP26.79■■□□□ 1.88
LYSMD4-208ENST00000493256 PAGR1Q9BTK6 254 aa26.79■■□□□ 1.88
LYSMD4-208ENST00000493256 CYP2D6P10635 497 aa26.78■■□□□ 1.88
LYSMD4-208ENST00000493256 USP14P54578 494 aa26.78■■□□□ 1.88
LYSMD4-208ENST00000493256 ERVK-9P63128 1117 aa26.78■■□□□ 1.88
LYSMD4-208ENST00000493256 ERVK-24P63145 666 aa26.78■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L15C9J2P7 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L13C9JLJ4 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L11C9JVI0 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L18D6R9N7 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L22D6RA61 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L17D6RBQ6 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L19D6RCP7 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L20D6RJB6 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 PRKAB2O43741 272 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 MBD4O95243 580 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 TFRCP02786 760 aaKnown RBP26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 CHGBP05060 677 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 VCAM1P19320 739 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 USP17L24Q0WX57 530 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 TRIM32Q13049 653 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 SEPT2Q15019 361 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 DPF3Q92784 378 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 PORCNQ9H237 461 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 MYH7P12883 1935 aa26.77■■□□□ 1.88
LYSMD4-208ENST00000493256 MAPK4P31152 587 aa26.76■■□□□ 1.87
LYSMD4-208ENST00000493256 SLC44A5Q8NCS7 719 aa26.76■■□□□ 1.87
LYSMD4-208ENST00000493256 TRIB2Q92519 343 aa26.76■■□□□ 1.87
LYSMD4-208ENST00000493256 HTATIP2Q9BUP3 242 aa26.76■■□□□ 1.87
LYSMD4-208ENST00000493256 BAZ2AQ9UIF9 1905 aaKnown RBP26.75■■□□□ 1.87
LYSMD4-208ENST00000493256 CYP2B6P20813 491 aa26.75■■□□□ 1.87
LYSMD4-208ENST00000493256 CATSPERGQ6ZRH7 1159 aa26.75■■□□□ 1.87
LYSMD4-208ENST00000493256 SOCS4Q8WXH5 440 aa26.75■■□□□ 1.87
LYSMD4-208ENST00000493256 NUDT12Q9BQG2 462 aa26.75■■□□□ 1.87
LYSMD4-208ENST00000493256 CRISPLD2Q9H0B8 497 aa26.75■■□□□ 1.87
LYSMD4-208ENST00000493256 MPHOSPH10O00566 681 aaKnown RBP26.74■■□□□ 1.87
LYSMD4-208ENST00000493256 CNMDO75829 334 aa26.74■■□□□ 1.87
LYSMD4-208ENST00000493256 CAPN2P17655 700 aa26.74■■□□□ 1.87
LYSMD4-208ENST00000493256 ATP8A2Q9NTI2 1148 aa26.74■■□□□ 1.87
LYSMD4-208ENST00000493256 COLQQ9Y215 455 aaPredicted RBP26.74■■□□□ 1.87
LYSMD4-208ENST00000493256 RABGAP1Q9Y3P9 1069 aa26.74■■□□□ 1.87
LYSMD4-208ENST00000493256 TRIOBPQ9H2D6 2365 aa26.73■■□□□ 1.87
LYSMD4-208ENST00000493256 UBE3CQ15386 1083 aa26.73■■□□□ 1.87
LYSMD4-208ENST00000493256 GPR142Q7Z601 462 aa26.73■■□□□ 1.87
LYSMD4-208ENST00000493256 CCAR1Q8IX12 1150 aaKnown RBP26.73■■□□□ 1.87
LYSMD4-208ENST00000493256 DYNLL2Q96FJ2 89 aa26.73■■□□□ 1.87
LYSMD4-208ENST00000493256 RPAP3Q9H6T3 665 aaPredicted RBP26.73■■□□□ 1.87
LYSMD4-208ENST00000493256 RPTORQ8N122 1335 aa26.72■■□□□ 1.87
LYSMD4-208ENST00000493256 A0A1W2PRG0 241 aa26.72■■□□□ 1.87
LYSMD4-208ENST00000493256 XRCC5P13010 732 aaKnown RBP26.72■■□□□ 1.87
LYSMD4-208ENST00000493256 USP6NLQ92738 828 aa26.72■■□□□ 1.87
LYSMD4-208ENST00000493256 SWAP70Q9UH65 585 aa26.72■■□□□ 1.87
LYSMD4-208ENST00000493256 MYH8P13535 1937 aa26.72■■□□□ 1.87
LYSMD4-208ENST00000493256 MORN1Q5T089 497 aa26.71■■□□□ 1.87
LYSMD4-208ENST00000493256 PLEKHH3Q7Z736 793 aa26.71■■□□□ 1.87
LYSMD4-208ENST00000493256 HMX1Q9NP08 348 aaPredicted RBP26.71■■□□□ 1.87
LYSMD4-208ENST00000493256 ECHDC1Q9NTX5 307 aa26.71■■□□□ 1.87
LYSMD4-208ENST00000493256 CYP2D7A0A087X1C5 515 aa26.7■■□□□ 1.86
LYSMD4-208ENST00000493256 SMIM22K7EJ46 135 aa26.7■■□□□ 1.86
LYSMD4-208ENST00000493256 MAP3K21Q5TCX8 1036 aa26.7■■□□□ 1.86
LYSMD4-208ENST00000493256 LBX2Q6XYB7 198 aa26.7■■□□□ 1.86
LYSMD4-208ENST00000493256 TMEM179Q6ZVK1 233 aa26.7■■□□□ 1.86
LYSMD4-208ENST00000493256 DCTPP1Q9H773 170 aa26.7■■□□□ 1.86
LYSMD4-208ENST00000493256 SPDYE16A6NNV3 312 aaPredicted RBP26.69■■□□□ 1.86
LYSMD4-208ENST00000493256 C12orf60Q5U649 245 aa26.69■■□□□ 1.86
LYSMD4-208ENST00000493256 ZSCAN25Q6NSZ9 544 aa26.69■■□□□ 1.86
LYSMD4-208ENST00000493256 PUS7LQ9H0K6 701 aaKnown RBP26.69■■□□□ 1.86
LYSMD4-208ENST00000493256 BTBD7Q9P203 1132 aa26.69■■□□□ 1.86
LYSMD4-208ENST00000493256 USP17L12C9JPN9 530 aa26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 USP17L21D6R901 530 aa26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 PRKAR2AP13861 404 aaKnown RBP26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 AKR1B1P15121 316 aa26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 ZKSCAN1P17029 563 aaPredicted RBP26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 RGS2P41220 211 aa26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 CCNA1P78396 465 aa26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 TRMT44Q8IYL2 757 aaKnown RBP26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 DIS3LQ8TF46 1054 aaKnown RBP26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 PAWRQ96IZ0 340 aaKnown RBP26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 CWC22Q9HCG8 908 aaKnown RBP26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 SLC4A4Q9Y6R1 1079 aa26.68■■□□□ 1.86
LYSMD4-208ENST00000493256 CCL14Q16627 93 aa26.67■■□□□ 1.86
LYSMD4-208ENST00000493256 CLEC10AQ8IUN9 316 aa26.67■■□□□ 1.86
LYSMD4-208ENST00000493256 APBA2Q99767 749 aa26.67■■□□□ 1.86
LYSMD4-208ENST00000493256 CDK8P49336 464 aa26.66■■□□□ 1.86
LYSMD4-208ENST00000493256 KIAA1755Q5JYT7 1200 aa26.66■■□□□ 1.86
LYSMD4-208ENST00000493256 TSHZ3Q63HK5 1081 aa26.66■■□□□ 1.86
LYSMD4-208ENST00000493256 CHRDL2Q6WN34 429 aa26.66■■□□□ 1.86
LYSMD4-208ENST00000493256 SIAH1Q8IUQ4 282 aa26.66■■□□□ 1.86
LYSMD4-208ENST00000493256 ANKLE1Q8NAG6 615 aa26.66■■□□□ 1.86
LYSMD4-208ENST00000493256 DDRGK1Q96HY6 314 aa26.66■■□□□ 1.86
LYSMD4-208ENST00000493256 NR2E3Q9Y5X4 410 aa26.66■■□□□ 1.86
LYSMD4-208ENST00000493256 RANBP2P49792 3224 aaKnown RBP26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 FXR1P51114 621 aaKnown RBP eCLIP26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 CACNB2Q08289 660 aaPredicted RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms