RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 USP17L15C9J2P7 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 USP17L13C9JLJ4 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 USP17L11C9JVI0 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 USP17L18D6R9N7 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 USP17L22D6RA61 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 USP17L17D6RBQ6 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 USP17L19D6RCP7 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 USP17L20D6RJB6 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 USP17L24Q0WX57 530 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 ABCB5Q2M3G0 1257 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 ERC1Q8IUD2 1116 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 ACER1Q8TDN7 264 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 C12orf42Q96LP6 360 aa27.4■■□□□ 1.98
HMG20B-214ENST00000493191 CWC22Q9HCG8 908 aaKnown RBP27.4■■□□□ 1.98
HMG20B-214ENST00000493191 CNMDO75829 334 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 SYN1P17600 705 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 CCND3P30281 292 aaPredicted RBP27.39■■□□□ 1.98
HMG20B-214ENST00000493191 PLCD1P51178 756 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 USP14P54578 494 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 PANK1Q8TE04 598 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 LRCH3Q96II8 777 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 GDF15Q99988 308 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 IL1RAPL2Q9NP60 686 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 RABGAP1Q9Y3P9 1069 aa27.39■■□□□ 1.98
HMG20B-214ENST00000493191 CATSPERGQ6ZRH7 1159 aa27.38■■□□□ 1.97
HMG20B-214ENST00000493191 APBA2Q99767 749 aa27.38■■□□□ 1.97
HMG20B-214ENST00000493191 RIOK1Q9BRS2 568 aaKnown RBP27.38■■□□□ 1.97
HMG20B-214ENST00000493191 SHMT1P34896 483 aa27.37■■□□□ 1.97
HMG20B-214ENST00000493191 WDR78Q5VTH9 848 aa27.37■■□□□ 1.97
HMG20B-214ENST00000493191 KIAA1683Q9H0B3 1180 aa27.37■■□□□ 1.97
HMG20B-214ENST00000493191 CABP5Q9NP86 173 aa27.37■■□□□ 1.97
HMG20B-214ENST00000493191 PFASO15067 1338 aa27.37■■□□□ 1.97
HMG20B-214ENST00000493191 MAGEB6P1A0A0J9YX57 407 aa27.36■■□□□ 1.97
HMG20B-214ENST00000493191 POLR3DP05423 398 aaPredicted RBP27.36■■□□□ 1.97
HMG20B-214ENST00000493191 VCAM1P19320 739 aa27.36■■□□□ 1.97
HMG20B-214ENST00000493191 BMP8BP34820 402 aa27.36■■□□□ 1.97
HMG20B-214ENST00000493191 CCNA1P78396 465 aa27.36■■□□□ 1.97
HMG20B-214ENST00000493191 MAP2K5Q13163 448 aa27.36■■□□□ 1.97
HMG20B-214ENST00000493191 TMED8Q6PL24 325 aaPredicted RBP27.36■■□□□ 1.97
HMG20B-214ENST00000493191 LHX8Q68G74 356 aa27.35■■□□□ 1.97
HMG20B-214ENST00000493191 EDC3Q96F86 508 aaKnown RBP27.35■■□□□ 1.97
HMG20B-214ENST00000493191 GUCY1A2P33402 732 aa27.34■■□□□ 1.97
HMG20B-214ENST00000493191 EVX2Q03828 476 aa27.34■■□□□ 1.97
HMG20B-214ENST00000493191 SLC9C2Q5TAH2 1124 aa27.34■■□□□ 1.97
HMG20B-214ENST00000493191 RHPN1Q8TCX5 695 aa27.34■■□□□ 1.97
HMG20B-214ENST00000493191 APBB1O00213 710 aa27.33■■□□□ 1.97
HMG20B-214ENST00000493191 GLRX3O76003 335 aaKnown RBP27.33■■□□□ 1.97
HMG20B-214ENST00000493191 PDE6AP16499 860 aa27.33■■□□□ 1.97
HMG20B-214ENST00000493191 MAGEA10P43363 369 aaPredicted RBP27.33■■□□□ 1.97
HMG20B-214ENST00000493191 SEPT2Q15019 361 aa27.33■■□□□ 1.97
HMG20B-214ENST00000493191 TTF1Q15361 905 aaPredicted RBP27.33■■□□□ 1.97
HMG20B-214ENST00000493191 HSP90AB4PQ58FF6 505 aa27.33■■□□□ 1.97
HMG20B-214ENST00000493191 MIER1Q8N108 512 aa27.33■■□□□ 1.97
HMG20B-214ENST00000493191 BCL11AQ9H165 835 aa27.33■■□□□ 1.97
HMG20B-214ENST00000493191 RPAP3Q9H6T3 665 aaPredicted RBP27.33■■□□□ 1.97
HMG20B-214ENST00000493191 FLRT1Q9NZU1 646 aa27.33■■□□□ 1.97
HMG20B-214ENST00000493191 BTBD7Q9P203 1132 aa27.33■■□□□ 1.97
HMG20B-214ENST00000493191 COL6A1P12109 1028 aa27.32■■□□□ 1.96
HMG20B-214ENST00000493191 CRNKL1Q9BZJ0 848 aaKnown RBP27.32■■□□□ 1.96
HMG20B-214ENST00000493191 MCM9Q9NXL9 1143 aa27.32■■□□□ 1.96
HMG20B-214ENST00000493191 COL6A3P12111 3177 aa27.32■■□□□ 1.96
HMG20B-214ENST00000493191 NAV1Q8NEY1 1877 aa27.32■■□□□ 1.96
HMG20B-214ENST00000493191 SLC15A5A6NIM6 579 aa27.31■■□□□ 1.96
HMG20B-214ENST00000493191 SPDYE16A6NNV3 312 aaPredicted RBP27.31■■□□□ 1.96
HMG20B-214ENST00000493191 PTPREP23469 700 aa27.31■■□□□ 1.96
HMG20B-214ENST00000493191 GABPAQ06546 454 aa27.31■■□□□ 1.96
HMG20B-214ENST00000493191 LBX2Q6XYB7 198 aa27.31■■□□□ 1.96
HMG20B-214ENST00000493191 DNAJC2Q99543 621 aaKnown RBP27.31■■□□□ 1.96
HMG20B-214ENST00000493191 GOLIM4O00461 696 aa27.3■■□□□ 1.96
HMG20B-214ENST00000493191 MPHOSPH10O00566 681 aaKnown RBP27.3■■□□□ 1.96
HMG20B-214ENST00000493191 MFSD14CQ5VZR4 134 aa27.3■■□□□ 1.96
HMG20B-214ENST00000493191 IVNS1ABPQ9Y6Y0 642 aa27.3■■□□□ 1.96
HMG20B-214ENST00000493191 ZNF532Q9HCE3 1301 aa27.3■■□□□ 1.96
HMG20B-214ENST00000493191 LRRC26Q2I0M4 334 aa27.29■■□□□ 1.96
HMG20B-214ENST00000493191 CLASRPQ8N2M8 674 aaKnown RBP27.29■■□□□ 1.96
HMG20B-214ENST00000493191 SDR42E1Q8WUS8 393 aa27.29■■□□□ 1.96
HMG20B-214ENST00000493191 DNAH12Q6ZR08 3092 aa27.28■■□□□ 1.96
HMG20B-214ENST00000493191 A0A1W2PRG0 241 aa27.28■■□□□ 1.96
HMG20B-214ENST00000493191 ATP2B2Q01814 1243 aa27.28■■□□□ 1.96
HMG20B-214ENST00000493191 TCRBV5S4A2TA0A5A2 114 aa27.27■■□□□ 1.96
HMG20B-214ENST00000493191 IFIT2P09913 472 aaKnown RBP27.27■■□□□ 1.96
HMG20B-214ENST00000493191 CYP2D6P10635 497 aa27.27■■□□□ 1.96
HMG20B-214ENST00000493191 GRB14Q14449 540 aa27.27■■□□□ 1.96
HMG20B-214ENST00000493191 LCORLQ8N3X6 602 aa27.27■■□□□ 1.96
HMG20B-214ENST00000493191 NPLOC4Q8TAT6 608 aa27.27■■□□□ 1.96
HMG20B-214ENST00000493191 KIF1BPQ96EK5 621 aa27.27■■□□□ 1.96
HMG20B-214ENST00000493191 UBE2OQ9C0C9 1292 aaKnown RBP27.27■■□□□ 1.96
HMG20B-214ENST00000493191 DCP1AQ9NPI6 582 aaPredicted RBP27.27■■□□□ 1.96
HMG20B-214ENST00000493191 FRMPD3Q5JV73 1810 aa27.26■■□□□ 1.95
HMG20B-214ENST00000493191 CNGA1P29973 690 aa27.26■■□□□ 1.95
HMG20B-214ENST00000493191 TDHQ8IZJ6 230 aa27.26■■□□□ 1.95
HMG20B-214ENST00000493191 SLC44A5Q8NCS7 719 aa27.26■■□□□ 1.95
HMG20B-214ENST00000493191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.26■■□□□ 1.95
HMG20B-214ENST00000493191 TANGO6Q9C0B7 1094 aa27.26■■□□□ 1.95
HMG20B-214ENST00000493191 HOXC6P09630 235 aa27.25■■□□□ 1.95
HMG20B-214ENST00000493191 CYP2C19P33261 490 aa27.25■■□□□ 1.95
HMG20B-214ENST00000493191 COG2Q14746 738 aa27.25■■□□□ 1.95
HMG20B-214ENST00000493191 SLC17A8Q8NDX2 589 aa27.25■■□□□ 1.95
HMG20B-214ENST00000493191 SENP6Q9GZR1 1112 aaPredicted RBP27.25■■□□□ 1.95
HMG20B-214ENST00000493191 ARMT1Q9H993 441 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms