RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 A0A1W2PPZ6 126 aa9.16□□□□□ -0.94
TPR-208ENST00000492973 GADD45BO75293 160 aaPredicted RBP9.16□□□□□ -0.94
TPR-208ENST00000492973 RBM6P78332 1123 aaKnown RBP9.16□□□□□ -0.94
TPR-208ENST00000492973 GRM2Q14416 872 aa9.16□□□□□ -0.94
TPR-208ENST00000492973 SPRED3Q2MJR0 410 aa9.16□□□□□ -0.94
TPR-208ENST00000492973 FAM117BQ6P1L5 589 aa9.16□□□□□ -0.94
TPR-208ENST00000492973 IGF2-ASQ6U949 168 aa9.16□□□□□ -0.94
TPR-208ENST00000492973 WWC3Q9ULE0 1092 aa9.16□□□□□ -0.94
TPR-208ENST00000492973 PEAK1Q9H792 1746 aa9.16□□□□□ -0.94
TPR-208ENST00000492973 C9orf172C9J069 976 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 ITPKAP23677 461 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 RXRBP28702 533 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 EIF4A2Q14240 407 aaKnown RBP9.15□□□□□ -0.94
TPR-208ENST00000492973 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
TPR-208ENST00000492973 CCDC184Q52MB2 194 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 NBPF6Q5VWK0 638 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 ALG1LQ6GMV1 187 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 TOM1L2Q6ZVM7 507 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 KLHL23Q8NBE8 558 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 NBPF4Q96M43 638 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 CARD10Q9BWT7 1032 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 NLRP2Q9NX02 1062 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
TPR-208ENST00000492973 PLCH1Q4KWH8 1693 aa9.15□□□□□ -0.94
TPR-208ENST00000492973 CDK12Q9NYV4 1490 aaPredicted RBP9.15□□□□□ -0.95
TPR-208ENST00000492973 CRB1P82279 1406 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 NRAPQ86VF7 1730 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 ANKRD26Q9UPS8 1709 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 PROCP04070 461 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 IL13P35225 146 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 ADGRE1Q14246 886 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 FOXD4L6Q3SYB3 417 aaPredicted RBP9.14□□□□□ -0.95
TPR-208ENST00000492973 FOXD4L3Q6VB84 417 aaPredicted RBP9.14□□□□□ -0.95
TPR-208ENST00000492973 TCP11L2Q8N4U5 519 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 OSGEPQ9NPF4 335 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 SEC31BQ9NQW1 1179 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 USP35Q9P2H5 1018 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 NWD2Q9ULI1 1742 aa9.14□□□□□ -0.95
TPR-208ENST00000492973 GLI3P10071 1580 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 SOX1O00570 391 aaPredicted RBP9.13□□□□□ -0.95
TPR-208ENST00000492973 LDHBP07195 334 aaKnown RBP9.13□□□□□ -0.95
TPR-208ENST00000492973 ESRRAP11474 423 aaPredicted RBP9.13□□□□□ -0.95
TPR-208ENST00000492973 CD68P34810 354 aaPredicted RBP9.13□□□□□ -0.95
TPR-208ENST00000492973 ATP2B2Q01814 1243 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 NRG1Q02297 640 aaPredicted RBP9.13□□□□□ -0.95
TPR-208ENST00000492973 PTPN12Q05209 780 aaKnown RBP9.13□□□□□ -0.95
TPR-208ENST00000492973 IKBKEQ14164 716 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 MBTPS1Q14703 1052 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 HGSNATQ68CP4 663 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 GPAT2Q6NUI2 795 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 USHBP1Q8N6Y0 703 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 KLHDC7BQ96G42 594 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 SPOCK3Q9BQ16 436 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 CLEC4MQ9H2X3 399 aaPredicted RBP9.13□□□□□ -0.95
TPR-208ENST00000492973 KCNK4Q9NYG8 393 aa9.13□□□□□ -0.95
TPR-208ENST00000492973 COL3A1P02461 1466 aaPredicted RBP9.13□□□□□ -0.95
TPR-208ENST00000492973 MYBBP1AQ9BQG0 1328 aaKnown RBP9.12□□□□□ -0.95
TPR-208ENST00000492973 IGHA1P01876 353 aa9.12□□□□□ -0.95
TPR-208ENST00000492973 BCO2Q9BYV7 579 aa9.12□□□□□ -0.95
TPR-208ENST00000492973 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
TPR-208ENST00000492973 SOX17Q9H6I2 414 aaPredicted RBP9.12□□□□□ -0.95
TPR-208ENST00000492973 THRAP3Q9Y2W1 955 aaKnown RBP9.12□□□□□ -0.95
TPR-208ENST00000492973 NCAPD2Q15021 1401 aa9.12□□□□□ -0.95
TPR-208ENST00000492973 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.11□□□□□ -0.95
TPR-208ENST00000492973 IGSF1Q8N6C5 1336 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 DIAPH1O60610 1272 aaKnown RBP9.11□□□□□ -0.95
TPR-208ENST00000492973 ADAM11O75078 769 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 ERCC3P19447 782 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 PCDH1Q08174 1060 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 C19orf57Q0VDD7 668 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 SUZ12Q15022 739 aaKnown RBP9.11□□□□□ -0.95
TPR-208ENST00000492973 ZNF423Q2M1K9 1284 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 SLC7A3Q8WY07 619 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 MRPL18Q9H0U6 180 aaKnown RBP9.11□□□□□ -0.95
TPR-208ENST00000492973 DISP2A7MBM2 1401 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 RGS12O14924 1447 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 LTN1O94822 1766 aa9.11□□□□□ -0.95
TPR-208ENST00000492973 MSTNO14793 375 aa9.1□□□□□ -0.95
TPR-208ENST00000492973 PRPF40AO75400 957 aaKnown RBP9.1□□□□□ -0.95
TPR-208ENST00000492973 EAPPQ56P03 285 aaPredicted RBP9.1□□□□□ -0.95
TPR-208ENST00000492973 NXPE4Q6UWF7 544 aa9.1□□□□□ -0.95
TPR-208ENST00000492973 FBXO33Q7Z6M2 555 aa9.1□□□□□ -0.95
TPR-208ENST00000492973 TMEM130Q8N3G9 435 aa9.1□□□□□ -0.95
TPR-208ENST00000492973 FOXD4L4Q8WXT5 416 aaPredicted RBP9.1□□□□□ -0.95
TPR-208ENST00000492973 CFAP53Q96M91 514 aa9.1□□□□□ -0.95
TPR-208ENST00000492973 DDX3YO15523 660 aaKnown RBP9.09□□□□□ -0.95
TPR-208ENST00000492973 WISP1O95388 367 aa9.09□□□□□ -0.95
TPR-208ENST00000492973 ARL4DP49703 201 aa9.09□□□□□ -0.95
TPR-208ENST00000492973 TMCO4Q5TGY1 634 aa9.09□□□□□ -0.95
TPR-208ENST00000492973 TXNRD3Q86VQ6 643 aa9.09□□□□□ -0.95
TPR-208ENST00000492973 OSBPL7Q9BZF2 842 aa9.09□□□□□ -0.95
TPR-208ENST00000492973 MRS2Q9HD23 443 aa9.09□□□□□ -0.95
TPR-208ENST00000492973 F8W735 103 aaPredicted RBP9.08□□□□□ -0.96
TPR-208ENST00000492973 GIPC1O14908 333 aa9.08□□□□□ -0.96
TPR-208ENST00000492973 B3GALT4O96024 378 aa9.08□□□□□ -0.96
TPR-208ENST00000492973 IL2RBP14784 551 aa9.08□□□□□ -0.96
TPR-208ENST00000492973 GATA4P43694 442 aa9.08□□□□□ -0.96
TPR-208ENST00000492973 RPS26P11Q5JNZ5 115 aaPredicted RBP9.08□□□□□ -0.96
TPR-208ENST00000492973 SULT6B1Q6IMI4 303 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms