RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 GREB1LQ9C091 1923 aaPredicted RBP30.74■■■□□ 2.51
TTC3-223ENST00000492275 CTDSPL2Q05D32 466 aa30.73■■■□□ 2.51
TTC3-223ENST00000492275 BMP2KLQ5H9B9 411 aa30.73■■■□□ 2.51
TTC3-223ENST00000492275 SIAH1Q8IUQ4 282 aa30.73■■■□□ 2.51
TTC3-223ENST00000492275 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.73■■■□□ 2.51
TTC3-223ENST00000492275 ZFYVE28Q9HCC9 887 aa30.73■■■□□ 2.51
TTC3-223ENST00000492275 ANAPC4Q9UJX5 808 aa30.73■■■□□ 2.51
TTC3-223ENST00000492275 AGTPBP1Q9UPW5 1226 aa30.73■■■□□ 2.51
TTC3-223ENST00000492275 TACC3Q9Y6A5 838 aa30.73■■■□□ 2.51
TTC3-223ENST00000492275 ZMYM6O95789 1325 aa30.73■■■□□ 2.51
TTC3-223ENST00000492275 PRDM1O75626 825 aa30.72■■■□□ 2.51
TTC3-223ENST00000492275 EMILIN3Q9NT22 766 aa30.72■■■□□ 2.51
TTC3-223ENST00000492275 CLEC10AQ8IUN9 316 aa30.71■■■□□ 2.51
TTC3-223ENST00000492275 ZNF296Q8WUU4 475 aaPredicted RBP30.71■■■□□ 2.51
TTC3-223ENST00000492275 INCENPQ9NQS7 918 aa30.71■■■□□ 2.51
TTC3-223ENST00000492275 SLC45A1Q9Y2W3 748 aa30.71■■■□□ 2.51
TTC3-223ENST00000492275 A0A1W2PRG0 241 aa30.7■■■□□ 2.51
TTC3-223ENST00000492275 SLC3A2P08195 630 aaKnown RBP30.7■■■□□ 2.51
TTC3-223ENST00000492275 RUFY2Q8WXA3 655 aa30.7■■■□□ 2.51
TTC3-223ENST00000492275 DSCC1Q9BVC3 393 aa30.7■■■□□ 2.51
TTC3-223ENST00000492275 KIAA1683Q9H0B3 1180 aa30.7■■■□□ 2.51
TTC3-223ENST00000492275 ZNF287Q9HBT7 754 aa30.7■■■□□ 2.51
TTC3-223ENST00000492275 RAD50Q92878 1312 aa30.7■■■□□ 2.5
TTC3-223ENST00000492275 TLR2O60603 784 aa30.69■■■□□ 2.5
TTC3-223ENST00000492275 PDE4BQ07343 736 aa30.69■■■□□ 2.5
TTC3-223ENST00000492275 USP17L2Q6R6M4 530 aa30.69■■■□□ 2.5
TTC3-223ENST00000492275 ZNF444Q8N0Y2 327 aaPredicted RBP30.69■■■□□ 2.5
TTC3-223ENST00000492275 TMOD4Q9NZQ9 345 aa30.69■■■□□ 2.5
TTC3-223ENST00000492275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.69■■■□□ 2.55e-6■□□□□ 9.7
TTC3-223ENST00000492275 CYP2C8P10632 490 aa30.68■■■□□ 2.5
TTC3-223ENST00000492275 ZYXQ15942 572 aaKnown RBP30.68■■■□□ 2.5
TTC3-223ENST00000492275 FEZ1Q99689 392 aa30.68■■■□□ 2.5
TTC3-223ENST00000492275 SGSM2O43147 1006 aa30.67■■■□□ 2.5
TTC3-223ENST00000492275 C12orf42Q96LP6 360 aa30.67■■■□□ 2.5
TTC3-223ENST00000492275 NBPF3Q9H094 633 aa30.67■■■□□ 2.5
TTC3-223ENST00000492275 KANSL2Q9H9L4 492 aa30.67■■■□□ 2.5
TTC3-223ENST00000492275 ADGRA2Q96PE1 1338 aa30.67■■■□□ 2.5
TTC3-223ENST00000492275 LAMA4Q16363 1823 aa30.66■■■□□ 2.5
TTC3-223ENST00000492275 FKTNO75072 461 aa30.66■■■□□ 2.5
TTC3-223ENST00000492275 FGRP09769 529 aa30.66■■■□□ 2.5
TTC3-223ENST00000492275 HAND2P61296 217 aa30.66■■■□□ 2.5
TTC3-223ENST00000492275 ICA1Q05084 483 aa30.66■■■□□ 2.5
TTC3-223ENST00000492275 IGKV6D-41A0A0C4DH26 115 aa30.65■■■□□ 2.5
TTC3-223ENST00000492275 EEF2P13639 858 aaKnown RBP30.65■■■□□ 2.5
TTC3-223ENST00000492275 FAM47AQ5JRC9 791 aa30.65■■■□□ 2.5
TTC3-223ENST00000492275 C17orf99Q6UX52 265 aa30.65■■■□□ 2.5
TTC3-223ENST00000492275 PARK7Q99497 189 aaKnown RBP30.65■■■□□ 2.5
TTC3-223ENST00000492275 HOXA7P31268 230 aaPredicted RBP30.64■■■□□ 2.5
TTC3-223ENST00000492275 USP14P54578 494 aa30.64■■■□□ 2.5
TTC3-223ENST00000492275 CPA4Q9UI42 421 aa30.64■■■□□ 2.5
TTC3-223ENST00000492275 TMX2Q9Y320 296 aa30.64■■■□□ 2.5
TTC3-223ENST00000492275 TFAP4Q01664 338 aa30.63■■■□□ 2.49
TTC3-223ENST00000492275 PTH1RQ03431 593 aa30.63■■■□□ 2.49
TTC3-223ENST00000492275 NEDD1Q8NHV4 660 aa30.63■■■□□ 2.49
TTC3-223ENST00000492275 ARHGEF10LQ9HCE6 1279 aa30.63■■■□□ 2.49
TTC3-223ENST00000492275 MYH4Q9Y623 1939 aa30.63■■■□□ 2.49
TTC3-223ENST00000492275 ORC4O43929 436 aa30.62■■■□□ 2.49
TTC3-223ENST00000492275 SP3Q02447 781 aa30.62■■■□□ 2.49
TTC3-223ENST00000492275 PABPC4Q13310 644 aaKnown RBP eCLIP30.62■■■□□ 2.49
TTC3-223ENST00000492275 KIAA1755Q5JYT7 1200 aa30.62■■■□□ 2.49
TTC3-223ENST00000492275 ASCC2Q9H1I8 757 aaPredicted RBP30.62■■■□□ 2.49
TTC3-223ENST00000492275 ZNF213O14771 459 aa30.61■■■□□ 2.49
TTC3-223ENST00000492275 OSBPP22059 807 aa30.61■■■□□ 2.49
TTC3-223ENST00000492275 TBC1D10CQ8IV04 446 aa30.61■■■□□ 2.49
TTC3-223ENST00000492275 PNMA3Q9UL41 463 aa30.61■■■□□ 2.49
TTC3-223ENST00000492275 PLIN4Q96Q06 1357 aa30.61■■■□□ 2.49
TTC3-223ENST00000492275 TSPY3P0CV98 308 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 TSPY8P0CW00 308 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 VCAM1P19320 739 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 CAP1Q01518 475 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 ATP2B2Q01814 1243 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 AKNAD1Q5T1N1 836 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 STAG1Q8WVM7 1258 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 CEP95Q96GE4 821 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 ESYT1Q9BSJ8 1104 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 NYAP2Q9P242 653 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 CTNNA3Q9UI47 895 aa30.6■■■□□ 2.49
TTC3-223ENST00000492275 BCRP11274 1271 aa30.59■■■□□ 2.49
TTC3-223ENST00000492275 NKX2-3Q8TAU0 364 aa30.59■■■□□ 2.49
TTC3-223ENST00000492275 MTMR4Q9NYA4 1195 aa30.59■■■□□ 2.49
TTC3-223ENST00000492275 RANBP6O60518 1105 aaKnown RBP30.58■■■□□ 2.49
TTC3-223ENST00000492275 CD99L2Q8TCZ2 262 aa30.58■■■□□ 2.49
TTC3-223ENST00000492275 SMCR8Q8TEV9 937 aaPredicted RBP30.58■■■□□ 2.49
TTC3-223ENST00000492275 P2RX7Q99572 595 aaKnown RBP30.58■■■□□ 2.49
TTC3-223ENST00000492275 SH2D4AQ9H788 454 aa30.58■■■□□ 2.49
TTC3-223ENST00000492275 VCPKMTQ9H867 229 aa30.58■■■□□ 2.49
TTC3-223ENST00000492275 ZSWIM8A7E2V4 1837 aa30.57■■■□□ 2.48
TTC3-223ENST00000492275 TSPY2A6NKD2 308 aa30.57■■■□□ 2.48
TTC3-223ENST00000492275 RRP12Q5JTH9 1297 aaKnown RBP30.57■■■□□ 2.48
TTC3-223ENST00000492275 CATSPERGQ6ZRH7 1159 aa30.57■■■□□ 2.48
TTC3-223ENST00000492275 MFSD6Q6ZSS7 791 aa30.57■■■□□ 2.48
TTC3-223ENST00000492275 IL17RBQ9NRM6 502 aa30.57■■■□□ 2.48
TTC3-223ENST00000492275 CLIP2Q9UDT6 1046 aa30.57■■■□□ 2.48
TTC3-223ENST00000492275 USP17L15C9J2P7 530 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 USP17L13C9JLJ4 530 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 USP17L11C9JVI0 530 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 USP17L18D6R9N7 530 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 USP17L22D6RA61 530 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 USP17L17D6RBQ6 530 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 USP17L19D6RCP7 530 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms