RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 FXR1P51114 621 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCDC6-202ENST00000491922 SLC8A3P57103 927 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 APBA1Q02410 837 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 IFFO1Q0D2I5 559 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 PDCLQ13371 301 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 BIRC2Q13490 618 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 RNF187Q5TA31 235 aaPredicted RBP7.24□□□□□ -1.25
CCDC6-202ENST00000491922 EMC10Q5UCC4 262 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 CDKAL1Q5VV42 579 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 NAIF1Q69YI7 327 aaPredicted RBP7.24□□□□□ -1.25
CCDC6-202ENST00000491922 KDM7AQ6ZMT4 941 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 ZNF662Q6ZS27 426 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 SND1Q7KZF4 910 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCDC6-202ENST00000491922 GSPT2Q8IYD1 628 aaKnown RBP7.24□□□□□ -1.25
CCDC6-202ENST00000491922 LINS1Q8NG48 757 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 CAGE1Q8TC20 777 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 KAZALD1Q96I82 304 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 MED15Q96RN5 788 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 DBNLQ9UJU6 430 aaKnown RBP7.24□□□□□ -1.25
CCDC6-202ENST00000491922 ACEP12821 1306 aa7.24□□□□□ -1.25
CCDC6-202ENST00000491922 NRXN3Q9Y4C0 1643 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 KLF18A0A0U1RQI7 1052 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ZMYND10O75800 440 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ATP1A1P05023 1023 aaKnown RBP7.23□□□□□ -1.25
CCDC6-202ENST00000491922 LSP1P33241 339 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 EPHB4P54760 987 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ICA1Q05084 483 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 GRIK3Q13003 919 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 SEMA3FQ13275 785 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 TNNI3KQ59H18 835 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 TLDC1Q6P9B6 456 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 EMBQ6PCB8 327 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.23□□□□□ -1.25
CCDC6-202ENST00000491922 CHST3Q7LGC8 479 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 PARP9Q8IXQ6 854 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ZNF473Q8WTR7 871 aaKnown RBP7.23□□□□□ -1.25
CCDC6-202ENST00000491922 JAKMIP2Q96AA8 810 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 SLF1Q9BQI6 1058 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 CENPHQ9H3R5 247 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 DDX20Q9UHI6 824 aaKnown RBP7.23□□□□□ -1.25
CCDC6-202ENST00000491922 GUCA1BQ9UMX6 200 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 HPS5Q9UPZ3 1129 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 FPGT-TNNI3KV9GXZ4 949 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 PTPRUQ92729 1446 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ECM29Q5VYK3 1845 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ANO9A1A5B4 782 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 PLEKHG3A1L390 1219 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 CDKL5O76039 1030 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 HSPD1P10809 573 aaKnown RBP7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ITIH3Q06033 890 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ZNF827Q17R98 1081 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 CWF19L2Q2TBE0 894 aaKnown RBP7.23□□□□□ -1.25
CCDC6-202ENST00000491922 TTMPQ5BVD1 217 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 TTC19Q6DKK2 380 aaPredicted RBP7.23□□□□□ -1.25
CCDC6-202ENST00000491922 RCSD1Q6JBY9 416 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 TAX1BP1Q86VP1 789 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 MMGT1Q8N4V1 131 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ARMC2Q8NEN0 867 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 SPATA20Q8TB22 786 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 CAPZA3Q96KX2 299 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 CCDC114Q96M63 670 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ALG1Q9BT22 464 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 SLC24A3Q9HC58 644 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 GJB4Q9NTQ9 266 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 HDAC6Q9UBN7 1215 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 EPN1Q9Y6I3 576 aaPredicted RBP7.23□□□□□ -1.25
CCDC6-202ENST00000491922 NWD1Q149M9 1564 aa7.23□□□□□ -1.25
CCDC6-202ENST00000491922 ENC1O14682 589 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 NDUFA10O95299 355 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 NNTQ13423 1086 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 ZMYM1Q5SVZ6 1142 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 KRT40Q6A162 431 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 CYB5D1Q6P9G0 228 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 CCDC121Q6ZUS5 278 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 DDX46Q7L014 1031 aaKnown RBP7.22□□□□□ -1.25
CCDC6-202ENST00000491922 CEP57Q86XR8 500 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 C3orf20Q8ND61 904 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 CAVIN3Q969G5 261 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 PSMD1Q99460 953 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 NUP88Q99567 741 aaPredicted RBP7.22□□□□□ -1.25
CCDC6-202ENST00000491922 COPRSQ9NQ92 184 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 BATF3Q9NR55 127 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 BSDC1Q9NW68 430 aaPredicted RBP7.22□□□□□ -1.25
CCDC6-202ENST00000491922 SERTAD1Q9UHV2 236 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 WDR19Q8NEZ3 1342 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 MYO5AQ9Y4I1 1855 aaKnown RBP7.22□□□□□ -1.25
CCDC6-202ENST00000491922 FER1L4A9Z1Z3 1794 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 POLR2DO15514 142 aaKnown RBP7.22□□□□□ -1.25
CCDC6-202ENST00000491922 PRC1O43663 620 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 PPP1R37O75864 691 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 ANXA1P04083 346 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 CHGBP05060 677 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 TNFRSF8P28908 595 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 TBC1D8BQ0IIM8 1120 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 PTGISQ16647 500 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 C6orf89Q6UWU4 347 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 ZNF572Q7Z3I7 529 aaPredicted RBP7.22□□□□□ -1.25
CCDC6-202ENST00000491922 TXNDC2Q86VQ3 553 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 NLRP14Q86W24 1093 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms