RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	CYP2C19	P33261	490 aa		23.66	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	SHROOM1	Q2M3G4	852 aa	Predicted RBP	23.66	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	C9orf50	Q5SZB4	431 aa		23.66	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	GJC2	Q5T442	439 aa	Predicted RBP	23.66	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	PRDM5	Q9NQX1	630 aa	Predicted RBP	23.66	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	KBTBD13	C9JR72	458 aa		23.65	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	HLA-DOA	P06340	250 aa		23.65	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	FOSL2	P15408	326 aa		23.65	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	CATSPERG	Q6ZRH7	1159 aa		23.65	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	BAD	Q92934	168 aa		23.65	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	C12orf42	Q96LP6	360 aa		23.65	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	FEZ1	Q99689	392 aa		23.65	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	API5	Q9BZZ5	524 aa	Known RBP	23.65	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	FLT1	P17948	1338 aa		23.64	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	MCAM	P43121	646 aa		23.64	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	USP14	P54578	494 aa		23.64	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	GRB14	Q14449	540 aa		23.64	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	TTYH1	Q9H313	450 aa	Predicted RBP	23.64	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	NOB1	Q9ULX3	412 aa	Known RBP	23.64	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	GH2	P01242	217 aa		23.63	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	ZYX	Q15942	572 aa	Known RBP	23.63	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	LBX2	Q6XYB7	198 aa		23.63	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	DPP9	Q86TI2	863 aa		23.63	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	TRPV1	Q8NER1	839 aa		23.63	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	NPLOC4	Q8TAT6	608 aa		23.63	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	MEIS3	Q99687	375 aa		23.63	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	23.63	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	SAP30BP	Q9UHR5	308 aa	Known RBP	23.62	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	TMEM265	A0A087WTH1	108 aa		23.61	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	STRN	O43815	780 aa		23.61	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	GNAI3	P08754	354 aa		23.61	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	CYBA	P13498	195 aa		23.61	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	SLFN5	Q08AF3	891 aa		23.61	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	MTX1	Q13505	466 aa		23.61	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	BTBD7	Q9P203	1132 aa		23.61	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	MAST2	Q6P0Q8	1798 aa		23.6	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	IGSF3	O75054	1194 aa		23.6	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	IGHA2	P01877	340 aa		23.6	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	MYCN	P04198	464 aa	Predicted RBP	23.6	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	G3BP1	Q13283	466 aa	Known RBP eCLIP	23.6	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	TRIM60	Q495X7	471 aa		23.6	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	OLFML2B	Q68BL8	750 aa		23.6	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	KIAA1683	Q9H0B3	1180 aa		23.6	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	SNX17	Q15036	470 aa		23.59	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	TATDN1	Q6P1N9	297 aa		23.59	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	PDLIM7	Q9NR12	457 aa		23.59	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	SNRK	Q9NRH2	765 aa		23.59	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	SEPT4	O43236	478 aa		23.58	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	VCAM1	P19320	739 aa		23.58	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	ADCYAP1R1	P41586	468 aa		23.58	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	RAB3GAP1	Q15042	981 aa		23.58	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	TJAP1	Q5JTD0	557 aa		23.58	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	C1orf53	Q5VUE5	145 aa		23.58	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	SLC5A4	Q9NY91	659 aa		23.58	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	TACC3	Q9Y6A5	838 aa		23.58	■■□□□ 1.37
CDK5RAP2-218	ENST00000491334	FRMPD3	Q5JV73	1810 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	TRIM43B	A6NCK2	446 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	COL9A1	P20849	921 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	CCDC158	Q5M9N0	1113 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	TTC39A	Q5SRH9	613 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	ANO1	Q5XXA6	986 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	SH3RF1	Q7Z6J0	888 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	ADGRA1	Q86SQ6	560 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	TRIM43	Q96BQ3	446 aa	Predicted RBP	23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	CABP5	Q9NP86	173 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	HOXC10	Q9NYD6	342 aa		23.57	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	SIPA1L1	O43166	1804 aa		23.56	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	TNFRSF10A	O00220	468 aa		23.56	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	ADORA2A	P29274	412 aa		23.56	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	CERKL	Q49MI3	558 aa	Predicted RBP	23.56	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	RNPC3	Q96LT9	517 aa	Known RBP	23.56	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	RPAP3	Q9H6T3	665 aa	Predicted RBP	23.56	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	SERPINB13	Q9UIV8	391 aa		23.56	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	LTBP2	Q14767	1821 aa		23.55	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	SPDYE16	A6NNV3	312 aa	Predicted RBP	23.55	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	CT47B1	P0C2W7	299 aa	Predicted RBP	23.55	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	ABCB5	Q2M3G0	1257 aa		23.55	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	CERS3	Q8IU89	383 aa		23.55	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	FERMT2	Q96AC1	680 aa		23.55	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	CYP2E1	P05181	493 aa	Predicted RBP	23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	USP5	P45974	858 aa		23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	TLE2	Q04725	743 aa		23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	COG2	Q14746	738 aa		23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	LRRC41	Q15345	812 aa		23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	TTC6	Q86TZ1	520 aa		23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	ACER1	Q8TDN7	264 aa		23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	MOV10L1	Q9BXT6	1211 aa	Known RBP	23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	EHD4	Q9H223	541 aa		23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	CDH23	Q9H251	3354 aa		23.54	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	RLF	Q13129	1914 aa		23.53	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	DYNLL1	P63167	89 aa	Known RBP	23.53	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	23.52	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	23.52	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	CYP7A1	P22680	504 aa		23.52	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	GRIN2C	Q14957	1233 aa		23.52	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	SHCBP1	Q8NEM2	672 aa		23.52	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	GPR108	Q9NPR9	543 aa		23.52	■■□□□ 1.36
CDK5RAP2-218	ENST00000491334	COBL	O75128	1261 aa		23.51	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	CLTB	P09497	229 aa		23.51	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	RAG1	P15918	1043 aa		23.51	■■□□□ 1.35

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms