RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 NBPF9Q3BBW0 867 aa10.17□□□□□ -0.78
CNOT4-210ENST00000491203 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
CNOT4-210ENST00000491203 CDC42EP5Q6NZY7 148 aa10.17□□□□□ -0.78
CNOT4-210ENST00000491203 SH3RF3Q8TEJ3 882 aaPredicted RBP10.17□□□□□ -0.78
CNOT4-210ENST00000491203 PUS7LQ9H0K6 701 aaKnown RBP10.17□□□□□ -0.78
CNOT4-210ENST00000491203 TDRD3Q9H7E2 651 aaKnown RBP10.17□□□□□ -0.78
CNOT4-210ENST00000491203 ARMT1Q9H993 441 aa10.17□□□□□ -0.78
CNOT4-210ENST00000491203 ZNF70Q9UC06 446 aaPredicted RBP10.17□□□□□ -0.78
CNOT4-210ENST00000491203 PCDHGC3Q9UN70 934 aa10.17□□□□□ -0.78
CNOT4-210ENST00000491203 ADAMTSL1Q8N6G6 1762 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 RAD50Q92878 1312 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 CLRN2A0PK11 232 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 FAM187AA6NFU0 413 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 GPAA1O43292 621 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 SSTR3P32745 418 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-210ENST00000491203 MFAP1P55081 439 aaKnown RBP10.16□□□□□ -0.78
CNOT4-210ENST00000491203 RHBDL3P58872 404 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 TEX11Q8IYF3 940 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 LCORLQ8N3X6 602 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 SEC62Q99442 399 aaKnown RBP10.16□□□□□ -0.78
CNOT4-210ENST00000491203 RIOK1Q9BRS2 568 aaKnown RBP10.16□□□□□ -0.78
CNOT4-210ENST00000491203 CRNKL1Q9BZJ0 848 aaKnown RBP10.16□□□□□ -0.78
CNOT4-210ENST00000491203 VEZTQ9HBM0 779 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 GGA3Q9NZ52 723 aa10.16□□□□□ -0.78
CNOT4-210ENST00000491203 ASTN2O75129 1339 aaPredicted RBP10.15□□□□□ -0.78
CNOT4-210ENST00000491203 GNAT2P19087 354 aa10.15□□□□□ -0.78
CNOT4-210ENST00000491203 USP5P45974 858 aa10.15□□□□□ -0.78
CNOT4-210ENST00000491203 CACNB3P54284 484 aa10.15□□□□□ -0.78
CNOT4-210ENST00000491203 PKDCCQ504Y2 493 aa10.15□□□□□ -0.78
CNOT4-210ENST00000491203 ANGEL2Q5VTE6 544 aaKnown RBP10.15□□□□□ -0.78
CNOT4-210ENST00000491203 CCDC129Q6ZRS4 1044 aa10.15□□□□□ -0.78
CNOT4-210ENST00000491203 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.78
CNOT4-210ENST00000491203 DCPSQ96C86 337 aaKnown RBP10.15□□□□□ -0.78
CNOT4-210ENST00000491203 STRBPQ96SI9 672 aaKnown RBP10.15□□□□□ -0.78
CNOT4-210ENST00000491203 TOR4AQ9NXH8 423 aa10.15□□□□□ -0.78
CNOT4-210ENST00000491203 SLC4A4Q9Y6R1 1079 aa10.15□□□□□ -0.78
CNOT4-210ENST00000491203 CCDC171Q6TFL3 1326 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 PITPNM2Q9BZ72 1349 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 TCP10L2B9ZVM9 353 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 PRKAB2O43741 272 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 WDHD1O75717 1129 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-210ENST00000491203 TNNI2P48788 182 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 PICALMQ13492 652 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 TNFAIP1Q13829 316 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 FKBP1CQ5VVH2 108 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 ZNF589Q86UQ0 364 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-210ENST00000491203 LDHDQ86WU2 507 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 TGFBRAP1Q8WUH2 860 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 DDRGK1Q96HY6 314 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 ESYT1Q9BSJ8 1104 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 IDI2Q9BXS1 227 aa10.14□□□□□ -0.79
CNOT4-210ENST00000491203 UTRNP46939 3433 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 SGSM2O43147 1006 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 ENTPD3O75355 529 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 CD2BP2O95400 341 aaKnown RBP10.13□□□□□ -0.79
CNOT4-210ENST00000491203 APPP05067 770 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 TCP10Q12799 353 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 NFIAQ12857 509 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 KIAA1211Q6ZU35 1233 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 MAPKAPK5Q8IW41 473 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 ZNF784Q8NCA9 323 aaPredicted RBP10.13□□□□□ -0.79
CNOT4-210ENST00000491203 SDR42E1Q8WUS8 393 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 SPIRE2Q8WWL2 714 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 NACAP1Q9BZK3 213 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 ATP8A2Q9NTI2 1148 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 PGAP2Q9UHJ9 254 aa10.13□□□□□ -0.79
CNOT4-210ENST00000491203 RPAP1Q9BWH6 1393 aaPredicted RBP10.13□□□□□ -0.79
CNOT4-210ENST00000491203 FLT1P17948 1338 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 PATL2C9JE40 543 aaKnown RBP10.12□□□□□ -0.79
CNOT4-210ENST00000491203 ST8SIA5O15466 376 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 TRIM32Q13049 653 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 RASA3Q14644 834 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 CDC37L1Q7L3B6 337 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 KRT26Q7Z3Y9 468 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 FAM83AQ86UY5 434 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 FAM151AQ8WW52 585 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 OSBPL5Q9H0X9 879 aaPredicted RBP10.12□□□□□ -0.79
CNOT4-210ENST00000491203 DEFB129Q9H1M3 183 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 IL25Q9H293 177 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 DDX4Q9NQI0 724 aaKnown RBP10.12□□□□□ -0.79
CNOT4-210ENST00000491203 SAP30BPQ9UHR5 308 aaKnown RBP10.12□□□□□ -0.79
CNOT4-210ENST00000491203 SCAF8Q9UPN6 1271 aaKnown RBP10.12□□□□□ -0.79
CNOT4-210ENST00000491203 PPP2R3BQ9Y5P8 575 aa10.12□□□□□ -0.79
CNOT4-210ENST00000491203 GSG1L2A8MUP6 293 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 EIF5BO60841 1220 aaKnown RBP10.11□□□□□ -0.79
CNOT4-210ENST00000491203 HSPD1P10809 573 aaKnown RBP10.11□□□□□ -0.79
CNOT4-210ENST00000491203 NDUFV2P19404 249 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 TDO2P48775 406 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-210ENST00000491203 VPS53Q5VIR6 699 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 MAP1SQ66K74 1059 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-210ENST00000491203 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 GIMAP6Q6P9H5 292 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 USP48Q86UV5 1035 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 ZSCAN29Q8IWY8 852 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-210ENST00000491203 PARP9Q8IXQ6 854 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 AMOTL1Q8IY63 956 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 IFNL3Q8IZI9 196 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 DSCC1Q9BVC3 393 aa10.11□□□□□ -0.79
CNOT4-210ENST00000491203 NAPBQ9H115 298 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms