RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CCDC63Q8NA47 563 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 TSKSQ9UJT2 592 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 ABCA8O94911 1581 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 EIF3HO15372 352 aaKnown RBP eCLIP12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 CTNNA1P35221 906 aaKnown RBP12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 KRT2P35908 639 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 KLHL7Q8IXQ5 586 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 TCP11Q8WWU5 503 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 DDX21Q9NR30 783 aaKnown RBP eCLIP12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 YEATS2Q9ULM3 1422 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 HIBCHQ6NVY1 386 aaPredicted RBP12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 CSGALNACT2Q8N6G5 542 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 TC2NQ8N9U0 490 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 KCNJ14Q9UNX9 436 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 SALL3Q9BXA9 1300 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 RANBP6O60518 1105 aaKnown RBP12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 ZNF174Q15697 407 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 IL17REQ8NFR9 667 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 LRP2BPQ9P2M1 347 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 DEXIO95424 95 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 CABP4P57796 275 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 ASIC1P78348 528 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 IFIT5Q13325 482 aaKnown RBP12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 HAUS7Q99871 368 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 MYL10Q9BUA6 226 aa12.59□□□□□ -0.39
CRNKL1-204ENST00000490910 TCHHQ07283 1943 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 MTMR3Q13615 1198 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 GRAMD1CQ8IYS0 662 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 ABCA6Q8N139 1617 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 SRGAP2O75044 1071 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 ARID5AQ03989 594 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 TSGA10IPQ3SY00 556 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 SAAL1Q96ER3 474 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 BLZF1Q9H2G9 400 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 CWC25Q9NXE8 425 aaPredicted RBP12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 HPCAL4Q9UM19 191 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 SHROOM2Q13796 1616 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 BTBD18B2RXH4 712 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 IRX1P78414 480 aaPredicted RBP12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 NOA1Q8NC60 698 aaKnown RBP12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 TRIM7Q9C029 511 aa12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 DBNLQ9UJU6 430 aaKnown RBP12.58□□□□□ -0.4
CRNKL1-204ENST00000490910 MAP2K7O14733 419 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 CNPY4Q8N129 248 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 APPBP2Q92624 585 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 GSDMAQ96QA5 445 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 SPAG5Q96R06 1193 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 EXOC5O00471 708 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 SASH1O94885 1247 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 DNM2P50570 870 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 TYW1BQ6NUM6 668 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 HOOK3Q86VS8 718 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 CCDC170Q8IYT3 715 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 CCDC26Q8TAB7 109 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 FERMT2Q96AC1 680 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 GJB4Q9NTQ9 266 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 ADGRL3Q9HAR2 1447 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 TARSL2A2RTX5 802 aaKnown RBP12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 MYO1FO00160 1098 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 TEX33O43247 280 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 LUC7L3O95232 432 aaKnown RBP12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 KIF6Q6ZMV9 814 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 ZMYM6O95789 1325 aa12.57□□□□□ -0.4
CRNKL1-204ENST00000490910 GPAA1O43292 621 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 SLC7A5Q01650 507 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 SPHKAPQ2M3C7 1700 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 NBPF9Q3BBW0 867 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 ZFYVE27Q5T4F4 411 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 PARP9Q8IXQ6 854 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 GSTTP1A0A1W2PQM5 241 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 GBP1P32455 592 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 MCM7P33993 719 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 RESP18Q5W5W9 173 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 AEBP2Q6ZN18 517 aaPredicted RBP12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 C2CD5Q86YS7 1000 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 SMYD4Q8IYR2 804 aaPredicted RBP12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 EPB41L5Q9HCM4 733 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 H7C1D1 291 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 HEXIM1O94992 359 aaKnown RBP12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 TSNAXIP1Q2TAA8 658 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 CCDC197Q8NCU1 140 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 PPP1R12CQ9BZL4 782 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 STK38LQ9Y2H1 464 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms