RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 CPS1P31327 1500 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 BACH1O14867 736 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 EVA1CP58658 441 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 CYP27A1Q02318 531 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 SPAG1Q07617 926 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
PCSK9-202ENST00000490692 NAA15Q9BXJ9 866 aaKnown RBP12.9□□□□□ -0.34
PCSK9-202ENST00000490692 ZBTB3Q9H5J0 574 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 TFR2Q9UP52 801 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 ATP7BP35670 1465 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 STOX1Q6ZVD7 989 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 FMNL3Q8IVF7 1028 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 PRPF38AQ8NAV1 312 aaKnown RBP12.9□□□□□ -0.34
PCSK9-202ENST00000490692 ZNF594Q96JF6 807 aaPredicted RBP12.9□□□□□ -0.34
PCSK9-202ENST00000490692 SH3BP1Q9Y3L3 701 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 A0A0U1RQJ8 604 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 EXOC5O00471 708 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 PDE4BQ07343 736 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
PCSK9-202ENST00000490692 SLC9C2Q5TAH2 1124 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 KLHL7Q8IXQ5 586 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 UBLCP1Q8WVY7 318 aaPredicted RBP12.89□□□□□ -0.35
PCSK9-202ENST00000490692 CCDC43Q96MW1 224 aaKnown RBP12.89□□□□□ -0.35
PCSK9-202ENST00000490692 ZHX3Q9H4I2 956 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 SNCBQ16143 134 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 REREQ9P2R6 1566 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 IRAK1P51617 712 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 TCP11Q8WWU5 503 aa12.89□□□□□ -0.35
PCSK9-202ENST00000490692 GOLGA6L10A0A0M3HER8 536 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 CHUKO15111 745 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 ATP5JP18859 108 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.353e-6■□□□□ 10.6
PCSK9-202ENST00000490692 METTL24Q5JXM2 366 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 RSRC2Q7L4I2 434 aaKnown RBP12.88□□□□□ -0.35
PCSK9-202ENST00000490692 KIF28PB7ZC32 967 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 KCNJ6P48051 423 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 TBC1D8BQ0IIM8 1120 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 AGLP35573 1532 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
PCSK9-202ENST00000490692 NNTQ13423 1086 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 RTN1Q16799 776 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 TRIM31Q9BZY9 425 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 ANKRD18BA2A2Z9 1011 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 NCAPHQ15003 741 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 COG1Q8WTW3 980 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 CEP89Q96ST8 783 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
PCSK9-202ENST00000490692 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
PCSK9-202ENST00000490692 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
PCSK9-202ENST00000490692 ERBB3P21860 1342 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 GOLGA8KD6RF30 607 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 PLCD1P51178 756 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 ARFGAP2Q8N6H7 521 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 MMS19Q96T76 1030 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 BPIFA3Q9BQP9 254 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
PCSK9-202ENST00000490692 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
PCSK9-202ENST00000490692 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
PCSK9-202ENST00000490692 MAP2P11137 1827 aaKnown RBP12.87□□□□□ -0.35
PCSK9-202ENST00000490692 COL3A1P02461 1466 aaPredicted RBP12.87□□□□□ -0.35
PCSK9-202ENST00000490692 ZNF185O15231 689 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 MFAP3LO75121 409 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 CTDNEP1O95476 244 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 GUCY1A3Q02108 690 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 SHC4Q6S5L8 630 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 TRIM6Q9C030 488 aaPredicted RBP12.87□□□□□ -0.35
PCSK9-202ENST00000490692 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 PLEKHG3A1L390 1219 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 RANBP6O60518 1105 aaKnown RBP12.87□□□□□ -0.35
PCSK9-202ENST00000490692 SKAP2O75563 359 aaPredicted RBP12.87□□□□□ -0.35
PCSK9-202ENST00000490692 GUCY2DQ02846 1103 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 PPARAQ07869 468 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 SPATA1Q5VX52 437 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 SPATA31D1Q6ZQQ2 1576 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 CEP120Q8N960 986 aa12.87□□□□□ -0.35
PCSK9-202ENST00000490692 ESYT3A0FGR9 886 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 VIMP08670 466 aaKnown RBP12.86□□□□□ -0.35
PCSK9-202ENST00000490692 ELF1P32519 619 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 MCM7P33993 719 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 STAT6P42226 847 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
PCSK9-202ENST00000490692 AP1ARQ63HQ0 302 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 TYW1BQ6NUM6 668 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 NLRP5P59047 1200 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 METTL16Q86W50 562 aaKnown RBP12.86□□□□□ -0.35
PCSK9-202ENST00000490692 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 FLT4P35916 1363 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 BUB1O43683 1085 aa12.86□□□□□ -0.35
PCSK9-202ENST00000490692 ATP1A1P05023 1023 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms