RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SCUBE3Q8IX30 993 aa9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 PI4KAP1Q8N8J0 262 aa9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 ZSCAN1Q8NBB4 408 aa9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 FAM84BQ96KN1 310 aaPredicted RBP9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 LRFN3Q9BTN0 628 aa9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 THEGQ9P2T0 379 aa9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 LAS1LQ9Y4W2 734 aaKnown RBP9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 AFG3L2Q9Y4W6 797 aa9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 ZHX2Q9Y6X8 837 aa9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 RLFQ13129 1914 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 PHF20L1A8MW92 1017 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 DDX58O95786 925 aaKnown RBP9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 GYG1P46976 350 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 GADL1Q6ZQY3 521 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 FAM151AQ8WW52 585 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 TEKT1Q969V4 418 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 MRIQ9BWK5 157 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 TMOD2Q9NZR1 351 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 HCN4Q9Y3Q4 1203 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 TRIOO75962 3097 aa9.11□□□□□ -0.95
PDLIM1-203ENST00000490391 LOC285556D6RIA3 1793 aa9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 ANKRD18BA2A2Z9 1011 aa9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 TTC24A2A3L6 582 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 PTPRAP18433 802 aa9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 CCND3P30281 292 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 HIBADHP31937 336 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 CACNB2Q08289 660 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 TREML2Q5T2D2 321 aa9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 ALYREFQ86V81 257 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 NECAB3Q96P71 396 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 SPSB2Q99619 263 aa9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 AGTPBP1Q9UPW5 1226 aa9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 DOCK1Q14185 1865 aa9.1□□□□□ -0.95
PDLIM1-203ENST00000490391 ZNF853P0CG23 659 aa9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 XRCC5P13010 732 aaKnown RBP9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 CYP2B6P20813 491 aa9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 RTP1P59025 263 aa9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 MRPS5P82675 430 aaKnown RBP9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 NFIAQ12857 509 aa9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 GCKRQ14397 625 aa9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 SCYL3Q8IZE3 742 aa9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 SENP6Q9GZR1 1112 aaPredicted RBP9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 DOCK2Q92608 1830 aa9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 BRWD1Q9NSI6 2320 aa9.09□□□□□ -0.95
PDLIM1-203ENST00000490391 GCLCP48506 637 aaPredicted RBP9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 NEXNQ0ZGT2 675 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 UBE4AQ14139 1066 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 E2F4Q16254 413 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 AKNAD1Q5T1N1 836 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 HHIPL2Q6UWX4 724 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 USP6NLQ92738 828 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 BADQ92934 168 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 KIFC2Q96AC6 838 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 C11orf16Q9NQ32 467 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 PRKAG2Q9UGJ0 569 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 IQSEC3Q9UPP2 1182 aaPredicted RBP9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 DAGLAQ9Y4D2 1042 aa9.08□□□□□ -0.96
PDLIM1-203ENST00000490391 WDR87Q6ZQQ6 2873 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 C5orf42Q9H799 3197 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 TRIM75PA6NK02 468 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 ELL2O00472 640 aaPredicted RBP9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 PLIN1O60240 522 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 BMP1P13497 986 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 SMPD1P17405 629 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 EPHB4P54760 987 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 FOXO4P98177 505 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 TCP10Q12799 353 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 CHAF1AQ13111 956 aaPredicted RBP9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 IFIT5Q13325 482 aaKnown RBP9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 FBXO33Q7Z6M2 555 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 CCDC84Q86UT8 332 aaPredicted RBP9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 ZFPM1Q8IX07 1006 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 C8orf58Q8NAV2 365 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 TBC1D22AQ8WUA7 517 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 PPM1EQ8WY54 764 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 ZNF576Q9H609 170 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 EPHX3Q9H6B9 360 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 PDLIM7Q9NR12 457 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 PICK1Q9NRD5 415 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 MORF4L1Q9UBU8 362 aa9.07□□□□□ -0.96
PDLIM1-203ENST00000490391 TRIM43BA6NCK2 446 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 SLURP2P0DP57 97 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 ZKSCAN1P17029 563 aaPredicted RBP9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 GMPRP36959 345 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 ADGRE1Q14246 886 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 PDE3AQ14432 1141 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 SNX17Q15036 470 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 CCL14Q16627 93 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 CDC42EP5Q6NZY7 148 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 PROCA1Q8NCQ7 364 aaPredicted RBP9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 SOCS4Q8WXH5 440 aa9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 TRIM43Q96BQ3 446 aaPredicted RBP9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 RNPC3Q96LT9 517 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms