RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CALM2P0DP24 149 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 CALM3P0DP25 149 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 EPS15P42566 896 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
VPS26A-205ENST00000489656 PPP4R3BQ5MIZ7 849 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 NSUN7Q8NE18 718 aaKnown RBP16.56■□□□□ 0.24
VPS26A-205ENST00000489656 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
VPS26A-205ENST00000489656 TRIM34Q9BYJ4 488 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
VPS26A-205ENST00000489656 GOLGA8AA7E2F4 631 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 CTDNEP1O95476 244 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
VPS26A-205ENST00000489656 AKR1B1P15121 316 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 GJB2P29033 226 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
VPS26A-205ENST00000489656 NUCB2P80303 420 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
VPS26A-205ENST00000489656 TROAPQ12815 778 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 RASA3Q14644 834 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 CATIPQ7Z7H3 387 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 TEPSINQ96N21 525 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
VPS26A-205ENST00000489656 NCOA5Q9HCD5 579 aaKnown RBP16.55■□□□□ 0.24
VPS26A-205ENST00000489656 PAPPA2Q9BXP8 1791 aa16.54■□□□□ 0.24
VPS26A-205ENST00000489656 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
VPS26A-205ENST00000489656 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
VPS26A-205ENST00000489656 HIRAP54198 1017 aaPredicted RBP16.54■□□□□ 0.24
VPS26A-205ENST00000489656 CERKLQ49MI3 558 aaPredicted RBP16.54■□□□□ 0.24
VPS26A-205ENST00000489656 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
VPS26A-205ENST00000489656 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
VPS26A-205ENST00000489656 FAM217BQ9NTX9 383 aaPredicted RBP16.54■□□□□ 0.24
VPS26A-205ENST00000489656 MTMR4Q9NYA4 1195 aa16.54■□□□□ 0.24
VPS26A-205ENST00000489656 PPP2R3BQ9Y5P8 575 aa16.54■□□□□ 0.24
VPS26A-205ENST00000489656 ASTN2O75129 1339 aaPredicted RBP16.53■□□□□ 0.24
VPS26A-205ENST00000489656 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
VPS26A-205ENST00000489656 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
VPS26A-205ENST00000489656 CDKL5O76039 1030 aa16.53■□□□□ 0.24
VPS26A-205ENST00000489656 RAB3GAP1Q15042 981 aa16.53■□□□□ 0.24
VPS26A-205ENST00000489656 NTRK3Q16288 839 aa16.53■□□□□ 0.24
VPS26A-205ENST00000489656 RTN1Q16799 776 aa16.53■□□□□ 0.24
VPS26A-205ENST00000489656 CPLX2Q6PUV4 134 aaKnown RBP16.53■□□□□ 0.24
VPS26A-205ENST00000489656 FANCBQ8NB91 859 aa16.53■□□□□ 0.24
VPS26A-205ENST00000489656 KAT14Q9H8E8 782 aa16.53■□□□□ 0.24
VPS26A-205ENST00000489656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.53■□□□□ 0.24
VPS26A-205ENST00000489656 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
VPS26A-205ENST00000489656 PHIPQ8WWQ0 1821 aa16.53■□□□□ 0.24
VPS26A-205ENST00000489656 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 CPLX1O14810 134 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 JAK2O60674 1132 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 TOP1P11387 765 aaKnown RBP16.52■□□□□ 0.24
VPS26A-205ENST00000489656 PDCP20941 246 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 CDC27P30260 824 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 ANGEL2Q5VTE6 544 aaKnown RBP16.52■□□□□ 0.24
VPS26A-205ENST00000489656 TMEM179Q6ZVK1 233 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 TMEM47Q9BQJ4 181 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 MYL10Q9BUA6 226 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 DEFB129Q9H1M3 183 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 KIF3AQ9Y496 699 aa16.52■□□□□ 0.24
VPS26A-205ENST00000489656 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 STK36Q9NRP7 1315 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 TTLL1O95922 423 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 SLURP2P0DP57 97 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 IFNAR1P17181 557 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 RXRAP19793 462 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 ADD1P35611 737 aaKnown RBP16.51■□□□□ 0.23
VPS26A-205ENST00000489656 USP50Q70EL3 339 aaPredicted RBP16.51■□□□□ 0.23
VPS26A-205ENST00000489656 RAB11FIP4Q86YS3 637 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 CDAN1Q8IWY9 1227 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 HOOK2Q96ED9 719 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 GGA3Q9NZ52 723 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 STX8Q9UNK0 236 aa16.51■□□□□ 0.23
VPS26A-205ENST00000489656 BRD1O95696 1058 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 SYT1P21579 422 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 ABCB5Q2M3G0 1257 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 NUP133Q8WUM0 1156 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 MKL1Q969V6 931 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 KANSL2Q9H9L4 492 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 GINM1Q9NU53 330 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 NYAP2Q9P242 653 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
VPS26A-205ENST00000489656 WDR33Q9C0J8 1336 aaKnown RBP16.49■□□□□ 0.23
VPS26A-205ENST00000489656 IQCA1LA6NCM1 817 aa16.49■□□□□ 0.23
VPS26A-205ENST00000489656 MPHOSPH10O00566 681 aaKnown RBP16.49■□□□□ 0.23
VPS26A-205ENST00000489656 STX6O43752 255 aa16.49■□□□□ 0.23
VPS26A-205ENST00000489656 FDPSP14324 419 aaKnown RBP16.49■□□□□ 0.23
VPS26A-205ENST00000489656 KIF5BP33176 963 aa16.49■□□□□ 0.23
VPS26A-205ENST00000489656 GUCY1A2P33402 732 aa16.49■□□□□ 0.23
VPS26A-205ENST00000489656 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
VPS26A-205ENST00000489656 GRM4Q14833 912 aa16.49■□□□□ 0.23
VPS26A-205ENST00000489656 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
VPS26A-205ENST00000489656 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
VPS26A-205ENST00000489656 ZC3H15Q8WU90 426 aaKnown RBP16.49■□□□□ 0.23
VPS26A-205ENST00000489656 CABP5Q9NP86 173 aa16.49■□□□□ 0.23
VPS26A-205ENST00000489656 ZDHHC9Q9Y397 364 aa16.49■□□□□ 0.23
VPS26A-205ENST00000489656 FMNL1O95466 1100 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-205ENST00000489656 EPHX2P34913 555 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms