RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 HSPA8P11142 646 aaKnown RBP9.36□□□□□ -0.91
SSR1-210ENST00000489567 CETPP11597 493 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 HAND2P61296 217 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 GPAT2Q6NUI2 795 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 NKX2-3Q8TAU0 364 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 ACER1Q8TDN7 264 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 BEGAINQ9BUH8 593 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 WDR18Q9BV38 432 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 PTPRFP10586 1907 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 LBX1P52954 281 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 HMGCS2P54868 508 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 MFAP1P55081 439 aaKnown RBP9.36□□□□□ -0.91
SSR1-210ENST00000489567 PTH1RQ03431 593 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 MTMR2Q13614 643 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 ANAPC4Q9UJX5 808 aa9.36□□□□□ -0.91
SSR1-210ENST00000489567 RAD50Q92878 1312 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 A0A1W2PRG0 241 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 BACE1P56817 501 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 CRHR2Q13324 411 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 TREML2Q5T2D2 321 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 TMEM179Q6ZVK1 233 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 TBC1D10CQ8IV04 446 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 CCDC17Q96LX7 622 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 DSCC1Q9BVC3 393 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 CABP5Q9NP86 173 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 SAGE1Q9NXZ1 904 aa9.35□□□□□ -0.91
SSR1-210ENST00000489567 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSR1-210ENST00000489567 CA12O43570 354 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
SSR1-210ENST00000489567 ZYXQ15942 572 aaKnown RBP9.34□□□□□ -0.91
SSR1-210ENST00000489567 SH3D19Q5HYK7 790 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 FAM47AQ5JRC9 791 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 RUFY2Q8WXA3 655 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 ESYT1Q9BSJ8 1104 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 TBC1D2Q9BYX2 928 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 AS3MTQ9HBK9 375 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 MYH8P13535 1937 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 GREB1LQ9C091 1923 aaPredicted RBP9.34□□□□□ -0.91
SSR1-210ENST00000489567 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 PDHXO00330 501 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 FGRP09769 529 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 KIAA1755Q5JYT7 1200 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 ANKRD23Q86SG2 305 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 CFHR5Q9BXR6 569 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 TAF6LQ9Y6J9 622 aa9.34□□□□□ -0.91
SSR1-210ENST00000489567 IGKV6D-41A0A0C4DH26 115 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 ALDH1A1P00352 501 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 CYP2C8P10632 490 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 EEF2P13639 858 aaKnown RBP9.33□□□□□ -0.92
SSR1-210ENST00000489567 ICA1Q05084 483 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 PDE4BQ07343 736 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 TAF1CQ15572 869 aaPredicted RBP9.33□□□□□ -0.92
SSR1-210ENST00000489567 OTUD7BQ6GQQ9 843 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 FASTKD5Q7L8L6 764 aaKnown RBP9.33□□□□□ -0.92
SSR1-210ENST00000489567 ZNF444Q8N0Y2 327 aaPredicted RBP9.33□□□□□ -0.92
SSR1-210ENST00000489567 KIAA1683Q9H0B3 1180 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 AGTPBP1Q9UPW5 1226 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 LOC285556D6RIA3 1793 aa9.33□□□□□ -0.92
SSR1-210ENST00000489567 NEDD4P46934 1319 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 C19orf81C9J6K1 198 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 ZNF213O14771 459 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 NMT2O60551 498 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 CDC45O75419 566 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 SLC3A2P08195 630 aaKnown RBP9.32□□□□□ -0.92
SSR1-210ENST00000489567 CAP1Q01518 475 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 TFAP4Q01664 338 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 AKNAD1Q5T1N1 836 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 PROCA1Q8NCQ7 364 aaPredicted RBP9.32□□□□□ -0.92
SSR1-210ENST00000489567 STAG1Q8WVM7 1258 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 MAP4K1Q92918 833 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 CEP95Q96GE4 821 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 FEZ1Q99689 392 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 LSG1Q9H089 658 aaKnown RBP9.32□□□□□ -0.92
SSR1-210ENST00000489567 KANSL2Q9H9L4 492 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 IL17RBQ9NRM6 502 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 PLIN4Q96Q06 1357 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 ADGRA2Q96PE1 1338 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 LAMA4Q16363 1823 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 GPR25O00155 361 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 ORC4O43929 436 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 TSPY3P0CV98 308 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 TSPY8P0CW00 308 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 ATP2B2Q01814 1243 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 RRP12Q5JTH9 1297 aaKnown RBP9.32□□□□□ -0.92
SSR1-210ENST00000489567 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 NEDD1Q8NHV4 660 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 ZNF296Q8WUU4 475 aaPredicted RBP9.32□□□□□ -0.92
SSR1-210ENST00000489567 C12orf42Q96LP6 360 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 ZNF287Q9HBT7 754 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 ZCCHC17Q9NP64 241 aaKnown RBP9.32□□□□□ -0.92
SSR1-210ENST00000489567 TMX2Q9Y320 296 aa9.32□□□□□ -0.92
SSR1-210ENST00000489567 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
SSR1-210ENST00000489567 TLR2O60603 784 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 CYP21A2P08686 494 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms