RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 GSPT1P15170 499 aaKnown RBP20.68■□□□□ 0.9
MDC1-206ENST00000489540 HOXA7P31268 230 aaPredicted RBP20.68■□□□□ 0.9
MDC1-206ENST00000489540 MCOLN1Q9GZU1 580 aa20.68■□□□□ 0.9
MDC1-206ENST00000489540 EMILIN3Q9NT22 766 aa20.68■□□□□ 0.9
MDC1-206ENST00000489540 CCDC171Q6TFL3 1326 aa20.67■□□□□ 0.9
MDC1-206ENST00000489540 FOXP2O15409 715 aa20.67■□□□□ 0.9
MDC1-206ENST00000489540 PPARAQ07869 468 aa20.67■□□□□ 0.9
MDC1-206ENST00000489540 VPS53Q5VIR6 699 aa20.67■□□□□ 0.9
MDC1-206ENST00000489540 CWC27Q6UX04 472 aaKnown RBP20.67■□□□□ 0.9
MDC1-206ENST00000489540 ZNF444Q8N0Y2 327 aaPredicted RBP20.67■□□□□ 0.9
MDC1-206ENST00000489540 ACER1Q8TDN7 264 aa20.67■□□□□ 0.9
MDC1-206ENST00000489540 SMCR8Q8TEV9 937 aaPredicted RBP20.67■□□□□ 0.9
MDC1-206ENST00000489540 CCDC136Q96JN2 1154 aa20.67■□□□□ 0.9
MDC1-206ENST00000489540 C12orf42Q96LP6 360 aa20.67■□□□□ 0.9
MDC1-206ENST00000489540 CPA4Q9UI42 421 aa20.67■□□□□ 0.9
MDC1-206ENST00000489540 ADGRA2Q96PE1 1338 aa20.66■□□□□ 0.9
MDC1-206ENST00000489540 CASP8AP2Q9UKL3 1982 aa20.66■□□□□ 0.9
MDC1-206ENST00000489540 HSPD1P10809 573 aaKnown RBP20.66■□□□□ 0.9
MDC1-206ENST00000489540 PDE4BQ07343 736 aa20.66■□□□□ 0.9
MDC1-206ENST00000489540 KIF22Q14807 665 aa20.66■□□□□ 0.9
MDC1-206ENST00000489540 ZNF589Q86UQ0 364 aaPredicted RBP20.66■□□□□ 0.9
MDC1-206ENST00000489540 STK11IPQ8N1F8 1099 aa20.66■□□□□ 0.9
MDC1-206ENST00000489540 CD99L2Q8TCZ2 262 aa20.66■□□□□ 0.9
MDC1-206ENST00000489540 KANSL2Q9H9L4 492 aa20.66■□□□□ 0.9
MDC1-206ENST00000489540 RASA1P20936 1047 aa20.65■□□□□ 0.9
MDC1-206ENST00000489540 ARHGEF10LQ9HCE6 1279 aa20.65■□□□□ 0.9
MDC1-206ENST00000489540 FGAP02671 866 aa20.64■□□□□ 0.89
MDC1-206ENST00000489540 BCRP11274 1271 aa20.64■□□□□ 0.89
MDC1-206ENST00000489540 GCLCP48506 637 aaPredicted RBP20.64■□□□□ 0.89
MDC1-206ENST00000489540 IRX3P78415 501 aaPredicted RBP20.64■□□□□ 0.89
MDC1-206ENST00000489540 LACTBP83111 547 aaPredicted RBP20.64■□□□□ 0.89
MDC1-206ENST00000489540 ICA1Q05084 483 aa20.64■□□□□ 0.89
MDC1-206ENST00000489540 ZYXQ15942 572 aaKnown RBP20.64■□□□□ 0.89
MDC1-206ENST00000489540 ASCC2Q9H1I8 757 aaPredicted RBP20.64■□□□□ 0.89
MDC1-206ENST00000489540 SH2D4AQ9H788 454 aa20.64■□□□□ 0.89
MDC1-206ENST00000489540 EFCC1Q9HA90 598 aa20.64■□□□□ 0.89
MDC1-206ENST00000489540 ANAPC4Q9UJX5 808 aa20.64■□□□□ 0.89
MDC1-206ENST00000489540 TRIM17Q9Y577 477 aa20.64■□□□□ 0.89
MDC1-206ENST00000489540 PHIPQ8WWQ0 1821 aa20.64■□□□□ 0.89
MDC1-206ENST00000489540 A0A1W2PRG0 241 aa20.63■□□□□ 0.89
MDC1-206ENST00000489540 OTOP1Q7RTM1 612 aa20.63■□□□□ 0.89
MDC1-206ENST00000489540 SIAH1Q8IUQ4 282 aa20.63■□□□□ 0.89
MDC1-206ENST00000489540 TMX2Q9Y320 296 aa20.63■□□□□ 0.89
MDC1-206ENST00000489540 ZMYM6O95789 1325 aa20.63■□□□□ 0.89
MDC1-206ENST00000489540 USP17L15C9J2P7 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 USP17L13C9JLJ4 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 USP17L11C9JVI0 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 USP17L18D6R9N7 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 USP17L22D6RA61 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 USP17L17D6RBQ6 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 USP17L19D6RCP7 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 USP17L20D6RJB6 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 PRDM1O75626 825 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 USP17L24Q0WX57 530 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 ERICH6BQ5W0A0 696 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 RUFY2Q8WXA3 655 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 ABHD8Q96I13 439 aa20.62■□□□□ 0.89
MDC1-206ENST00000489540 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.62■□□□□ 0.89
MDC1-206ENST00000489540 BAZ2AQ9UIF9 1905 aaKnown RBP20.62■□□□□ 0.89
MDC1-206ENST00000489540 GNRH1P01148 92 aa20.61■□□□□ 0.89
MDC1-206ENST00000489540 P2RX7Q99572 595 aaKnown RBP20.61■□□□□ 0.89
MDC1-206ENST00000489540 EEF2P13639 858 aaKnown RBP20.61■□□□□ 0.89
MDC1-206ENST00000489540 VCAM1P19320 739 aa20.61■□□□□ 0.89
MDC1-206ENST00000489540 IFFO2Q5TF58 517 aa20.61■□□□□ 0.89
MDC1-206ENST00000489540 FBXO46Q6PJ61 603 aaPredicted RBP20.61■□□□□ 0.89
MDC1-206ENST00000489540 GTF3C2Q8WUA4 911 aaPredicted RBP20.61■□□□□ 0.89
MDC1-206ENST00000489540 LPAR1Q92633 364 aa20.61■□□□□ 0.89
MDC1-206ENST00000489540 ATAD5Q96QE3 1844 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 TSPY3P0CV98 308 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 TSPY8P0CW00 308 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 CHMLP26374 656 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 ATP2B2Q01814 1243 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 CATSPERGQ6ZRH7 1159 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 ANKRD13CQ8N6S4 541 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 NEDD1Q8NHV4 660 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 DSCC1Q9BVC3 393 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 NYAP2Q9P242 653 aa20.6■□□□□ 0.89
MDC1-206ENST00000489540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.6■□□□□ 0.89
MDC1-206ENST00000489540 FGRP09769 529 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 HOXD10P28358 340 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 PSMC4P43686 418 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 HERVK_113P62684 666 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 TFAP4Q01664 338 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 FAM110CQ1W6H9 321 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 CLEC10AQ8IUN9 316 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 VCPKMTQ9H867 229 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 PTPN22Q9Y2R2 807 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 RAD50Q92878 1312 aa20.59■□□□□ 0.89
MDC1-206ENST00000489540 IGKV6D-41A0A0C4DH26 115 aa20.58■□□□□ 0.88
MDC1-206ENST00000489540 FMNL1O95466 1100 aaPredicted RBP20.58■□□□□ 0.88
MDC1-206ENST00000489540 PRMT2P55345 433 aa20.58■□□□□ 0.88
MDC1-206ENST00000489540 FCGRTP55899 365 aa20.58■□□□□ 0.88
MDC1-206ENST00000489540 CAP1Q01518 475 aa20.58■□□□□ 0.88
MDC1-206ENST00000489540 PPP4R3BQ5MIZ7 849 aa20.58■□□□□ 0.88
MDC1-206ENST00000489540 ARHGAP39Q9C0H5 1083 aa20.58■□□□□ 0.88
MDC1-206ENST00000489540 RPAP3Q9H6T3 665 aaPredicted RBP20.58■□□□□ 0.88
MDC1-206ENST00000489540 GOPCQ9HD26 462 aa20.58■□□□□ 0.88
MDC1-206ENST00000489540 CTNNA3Q9UI47 895 aa20.58■□□□□ 0.88
MDC1-206ENST00000489540 ZNF213O14771 459 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms