RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 CDK8P49336 464 aa22.77■■□□□ 1.24
MRPL55-230ENST00000489430 SOX10P56693 466 aa22.77■■□□□ 1.24
MRPL55-230ENST00000489430 ZNF333Q96JL9 665 aa22.77■■□□□ 1.24
MRPL55-230ENST00000489430 MYH7P12883 1935 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 PATL2C9JE40 543 aaKnown RBP22.76■■□□□ 1.23
MRPL55-230ENST00000489430 NUCB1Q02818 461 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 EVX2Q03828 476 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 SEPT2Q15019 361 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 ZMYM1Q5SVZ6 1142 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 SLC44A5Q8NCS7 719 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 DYNLL2Q96FJ2 89 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 NACAP1Q9BZK3 213 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 MYPNQ86TC9 1320 aa22.76■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L15C9J2P7 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L13C9JLJ4 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L11C9JVI0 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L18D6R9N7 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L22D6RA61 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L17D6RBQ6 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L19D6RCP7 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L20D6RJB6 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 MPHOSPH10O00566 681 aaKnown RBP22.75■■□□□ 1.23
MRPL55-230ENST00000489430 IGHDP01880 384 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 HERVK_113P62684 666 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 USP17L24Q0WX57 530 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 CHD1LQ86WJ1 897 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 RAET1EQ8TD07 263 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 ACER1Q8TDN7 264 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 P2RX7Q99572 595 aaKnown RBP22.75■■□□□ 1.23
MRPL55-230ENST00000489430 LNPKQ9C0E8 428 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 SH2D4AQ9H788 454 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 ZNF287Q9HBT7 754 aa22.75■■□□□ 1.23
MRPL55-230ENST00000489430 M0R2C6 588 aa22.74■■□□□ 1.23
MRPL55-230ENST00000489430 TNPO2O14787 897 aaKnown RBP22.74■■□□□ 1.23
MRPL55-230ENST00000489430 COA7Q96BR5 231 aa22.74■■□□□ 1.23
MRPL55-230ENST00000489430 OSBPL3Q9H4L5 887 aa22.74■■□□□ 1.23
MRPL55-230ENST00000489430 ROBO3Q96MS0 1386 aa22.74■■□□□ 1.23
MRPL55-230ENST00000489430 CYP2D7A0A087X1C5 515 aa22.73■■□□□ 1.23
MRPL55-230ENST00000489430 VCAM1P19320 739 aa22.73■■□□□ 1.23
MRPL55-230ENST00000489430 IRF5Q13568 498 aa22.73■■□□□ 1.23
MRPL55-230ENST00000489430 GPRC5AQ8NFJ5 357 aa22.73■■□□□ 1.23
MRPL55-230ENST00000489430 LPAR1Q92633 364 aa22.73■■□□□ 1.23
MRPL55-230ENST00000489430 KANSL2Q9H9L4 492 aa22.73■■□□□ 1.23
MRPL55-230ENST00000489430 ARHGEF10LQ9HCE6 1279 aa22.73■■□□□ 1.23
MRPL55-230ENST00000489430 GRK4P32298 578 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 TDO2P48775 406 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 PRKCZQ05513 592 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 LBX2Q6XYB7 198 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 CATSPERGQ6ZRH7 1159 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 SLAIN1Q8ND83 568 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 PXYLP1Q8TE99 480 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 TMEM106CQ9BVX2 250 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 TMX2Q9Y320 296 aa22.72■■□□□ 1.23
MRPL55-230ENST00000489430 APPP05067 770 aa22.71■■□□□ 1.23
MRPL55-230ENST00000489430 AKR1B1P15121 316 aa22.71■■□□□ 1.23
MRPL55-230ENST00000489430 ICA1Q05084 483 aa22.71■■□□□ 1.23
MRPL55-230ENST00000489430 IFNL3Q8IZI9 196 aa22.71■■□□□ 1.23
MRPL55-230ENST00000489430 EPB41L4AQ9HCS5 686 aaPredicted RBP22.71■■□□□ 1.23
MRPL55-230ENST00000489430 HELLSQ9NRZ9 838 aa22.71■■□□□ 1.23
MRPL55-230ENST00000489430 CENPFP49454 3210 aa22.7■■□□□ 1.23
MRPL55-230ENST00000489430 A0A1W2PRG0 241 aa22.7■■□□□ 1.22
MRPL55-230ENST00000489430 FLT3LGP49771 235 aa22.7■■□□□ 1.22
MRPL55-230ENST00000489430 ZYXQ15942 572 aaKnown RBP22.7■■□□□ 1.22
MRPL55-230ENST00000489430 B4GALNT3Q6L9W6 998 aa22.7■■□□□ 1.22
MRPL55-230ENST00000489430 MKNK2Q9HBH9 465 aa22.7■■□□□ 1.22
MRPL55-230ENST00000489430 RBPJLQ9UBG7 517 aa22.7■■□□□ 1.22
MRPL55-230ENST00000489430 RABGAP1Q9Y3P9 1069 aa22.7■■□□□ 1.22
MRPL55-230ENST00000489430 MINDY4BA8MYZ0 360 aa22.69■■□□□ 1.22
MRPL55-230ENST00000489430 SMIM22K7EJ46 135 aa22.69■■□□□ 1.22
MRPL55-230ENST00000489430 SIAH1Q8IUQ4 282 aa22.69■■□□□ 1.22
MRPL55-230ENST00000489430 SH3TC2Q8TF17 1288 aa22.69■■□□□ 1.22
MRPL55-230ENST00000489430 SEC62Q99442 399 aaKnown RBP22.69■■□□□ 1.22
MRPL55-230ENST00000489430 HOXC10Q9NYD6 342 aa22.69■■□□□ 1.22
MRPL55-230ENST00000489430 SLC3A2P08195 630 aaKnown RBP22.68■■□□□ 1.22
MRPL55-230ENST00000489430 MAPK4P31152 587 aa22.68■■□□□ 1.22
MRPL55-230ENST00000489430 ERVK-9P63128 1117 aa22.68■■□□□ 1.22
MRPL55-230ENST00000489430 ERVK-24P63145 666 aa22.68■■□□□ 1.22
MRPL55-230ENST00000489430 PLEKHM2Q8IWE5 1019 aa22.68■■□□□ 1.22
MRPL55-230ENST00000489430 NAPBQ9H115 298 aa22.68■■□□□ 1.22
MRPL55-230ENST00000489430 RPAP3Q9H6T3 665 aaPredicted RBP22.68■■□□□ 1.22
MRPL55-230ENST00000489430 TXNRD2Q9NNW7 524 aa22.68■■□□□ 1.22
MRPL55-230ENST00000489430 GABRQQ9UN88 632 aa22.68■■□□□ 1.22
MRPL55-230ENST00000489430 ECM2O94769 699 aaPredicted RBP22.67■■□□□ 1.22
MRPL55-230ENST00000489430 RASA1P20936 1047 aa22.67■■□□□ 1.22
MRPL55-230ENST00000489430 UBXN2AP68543 259 aa22.67■■□□□ 1.22
MRPL55-230ENST00000489430 CCNA1P78396 465 aa22.67■■□□□ 1.22
MRPL55-230ENST00000489430 COG2Q14746 738 aa22.67■■□□□ 1.22
MRPL55-230ENST00000489430 VCPKMTQ9H867 229 aa22.67■■□□□ 1.22
MRPL55-230ENST00000489430 ADCY3O60266 1144 aa22.66■■□□□ 1.22
MRPL55-230ENST00000489430 CAPN2P17655 700 aa22.66■■□□□ 1.22
MRPL55-230ENST00000489430 PDE4BQ07343 736 aa22.66■■□□□ 1.22
MRPL55-230ENST00000489430 MCMDC2Q4G0Z9 681 aa22.66■■□□□ 1.22
MRPL55-230ENST00000489430 SOCS4Q8WXH5 440 aa22.66■■□□□ 1.22
MRPL55-230ENST00000489430 GJD2Q9UKL4 321 aa22.66■■□□□ 1.22
MRPL55-230ENST00000489430 SYNPO2Q9UMS6 1093 aa22.66■■□□□ 1.22
MRPL55-230ENST00000489430 BAZ2AQ9UIF9 1905 aaKnown RBP22.66■■□□□ 1.22
MRPL55-230ENST00000489430 POTEFA5A3E0 1075 aa22.65■■□□□ 1.22
MRPL55-230ENST00000489430 TRIM6-TRIM34B2RNG4 842 aa22.65■■□□□ 1.22
MRPL55-230ENST00000489430 WDR46O15213 610 aaKnown RBP22.65■■□□□ 1.22
MRPL55-230ENST00000489430 EEF2P13639 858 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms