RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RRP1BQ14684 758 aaKnown RBP11.52□□□□□ -0.57
SSBP1-212ENST00000489378 PUM3Q15397 648 aaKnown RBP11.52□□□□□ -0.57
SSBP1-212ENST00000489378 Q3C1V9 767 aa11.52□□□□□ -0.57
SSBP1-212ENST00000489378 GPR142Q7Z601 462 aa11.52□□□□□ -0.57
SSBP1-212ENST00000489378 SH3RF1Q7Z6J0 888 aa11.52□□□□□ -0.57
SSBP1-212ENST00000489378 ATXN2LQ8WWM7 1075 aaKnown RBP11.52□□□□□ -0.57
SSBP1-212ENST00000489378 UHRF1Q96T88 793 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-212ENST00000489378 APBA2Q99767 749 aa11.52□□□□□ -0.57
SSBP1-212ENST00000489378 PDLIM7Q9NR12 457 aa11.52□□□□□ -0.57
SSBP1-212ENST00000489378 RBPJLQ9UBG7 517 aa11.52□□□□□ -0.57
SSBP1-212ENST00000489378 DDX20Q9UHI6 824 aaKnown RBP11.52□□□□□ -0.57
SSBP1-212ENST00000489378 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 SYNGAP1Q96PV0 1343 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 TRIM43BA6NCK2 446 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 DNM1LO00429 736 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-212ENST00000489378 MAPK4P31152 587 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 HERVK_113P62684 666 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 TRIM60Q495X7 471 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 SH3D19Q5HYK7 790 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 GJC2Q5T442 439 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-212ENST00000489378 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 ANKRD44Q8N8A2 993 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 LPAR1Q92633 364 aa11.51□□□□□ -0.57
SSBP1-212ENST00000489378 TRIM43Q96BQ3 446 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-212ENST00000489378 RNPC3Q96LT9 517 aaKnown RBP11.51□□□□□ -0.57
SSBP1-212ENST00000489378 BICC1Q9H694 974 aaKnown RBP11.51□□□□□ -0.57
SSBP1-212ENST00000489378 GAKO14976 1311 aa11.5□□□□□ -0.57
SSBP1-212ENST00000489378 TCF20Q9UGU0 1960 aaKnown RBP11.5□□□□□ -0.57
SSBP1-212ENST00000489378 ITGB8P26012 769 aa11.5□□□□□ -0.57
SSBP1-212ENST00000489378 RABL6Q3YEC7 729 aaPredicted RBP11.5□□□□□ -0.57
SSBP1-212ENST00000489378 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
SSBP1-212ENST00000489378 NECAB3Q96P71 396 aaPredicted RBP11.5□□□□□ -0.57
SSBP1-212ENST00000489378 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
SSBP1-212ENST00000489378 OSBPL5Q9H0X9 879 aaPredicted RBP11.5□□□□□ -0.57
SSBP1-212ENST00000489378 ZNF576Q9H609 170 aa11.5□□□□□ -0.57
SSBP1-212ENST00000489378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.5□□□□□ -0.57
SSBP1-212ENST00000489378 THEGQ9P2T0 379 aa11.5□□□□□ -0.57
SSBP1-212ENST00000489378 HCSTQ9UBK5 93 aa11.5□□□□□ -0.57
SSBP1-212ENST00000489378 MUC6Q6W4X9 2439 aa11.5□□□□□ -0.57
SSBP1-212ENST00000489378 VAMP4O75379 141 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 ALDH1L1O75891 902 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 SLC5A1P13866 664 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 DNAJB2P25686 324 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 CNGA1P29973 690 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
SSBP1-212ENST00000489378 FOSBP53539 338 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 ERVK-9P63128 1117 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 ERVK-24P63145 666 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 MRPS5P82675 430 aaKnown RBP11.49□□□□□ -0.57
SSBP1-212ENST00000489378 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 MTMR2Q13614 643 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 MFSD10Q14728 455 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 MFSD14CQ5VZR4 134 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 TRPV1Q8NER1 839 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 SALL1Q9NSC2 1324 aa11.49□□□□□ -0.57
SSBP1-212ENST00000489378 USP17L5A8MUK1 530 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 CAP2P40123 477 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 SNX17Q15036 470 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 SLC4A10Q6U841 1118 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 CCAR1Q8IX12 1150 aaKnown RBP11.48□□□□□ -0.57
SSBP1-212ENST00000489378 ZNF454Q8N9F8 522 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 LPIN2Q92539 896 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 EDC3Q96F86 508 aaKnown RBP11.48□□□□□ -0.57
SSBP1-212ENST00000489378 PAGR1Q9BTK6 254 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 C1QTNF1Q9BXJ1 281 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 TBC1D2Q9BYX2 928 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 UTYO14607 1347 aa11.48□□□□□ -0.57
SSBP1-212ENST00000489378 MSCO60682 206 aa11.47□□□□□ -0.57
SSBP1-212ENST00000489378 CYP2C19P33261 490 aa11.47□□□□□ -0.57
SSBP1-212ENST00000489378 BTDP43251 543 aa11.47□□□□□ -0.57
SSBP1-212ENST00000489378 CCDC85BQ15834 202 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-212ENST00000489378 TIFAQ96CG3 184 aa11.47□□□□□ -0.57
SSBP1-212ENST00000489378 SRCIN1Q9C0H9 1055 aa11.47□□□□□ -0.57
SSBP1-212ENST00000489378 VPS9D1Q9Y2B5 631 aa11.47□□□□□ -0.57
SSBP1-212ENST00000489378 FANCIQ9NVI1 1328 aa11.47□□□□□ -0.57
SSBP1-212ENST00000489378 BACE1P56817 501 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 RHBDL3P58872 404 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 JAG1P78504 1218 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 TLE2Q04725 743 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 AKNAD1Q5T1N1 836 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 ANO1Q5XXA6 986 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 WWC1Q8IX03 1113 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 LARP6Q9BRS8 491 aaKnown RBP11.46□□□□□ -0.57
SSBP1-212ENST00000489378 WDR18Q9BV38 432 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 PRDM12Q9H4Q4 367 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 AS3MTQ9HBK9 375 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 TMOD4Q9NZQ9 345 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 ARIH1Q9Y4X5 557 aaPredicted RBP11.46□□□□□ -0.57
SSBP1-212ENST00000489378 CHD9Q3L8U1 2897 aa11.46□□□□□ -0.57
SSBP1-212ENST00000489378 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-212ENST00000489378 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-212ENST00000489378 ADCYAP1R1P41586 468 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 PHKA1P46020 1223 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 ATP2B2Q01814 1243 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 ADGRE1Q14246 886 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 SHROOM1Q2M3G4 852 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-212ENST00000489378 DZIP1Q86YF9 867 aaKnown RBP11.45□□□□□ -0.58
SSBP1-212ENST00000489378 ARRDC4Q8NCT1 418 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms