RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ETF1P62495 437 aaKnown RBP6.62□□□□□ -1.35
XRN1-213ENST00000489241 JAG1P78504 1218 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 FAM160A1Q05DH4 1040 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 FZD5Q13467 585 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 SLBPQ14493 270 aaKnown RBP eCLIP6.62□□□□□ -1.35
XRN1-213ENST00000489241 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.62□□□□□ -1.35
XRN1-213ENST00000489241 MFSD2AQ8NA29 543 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 GOLM1Q8NBJ4 401 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 ZNF296Q8WUU4 475 aaPredicted RBP6.62□□□□□ -1.35
XRN1-213ENST00000489241 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 RHOVQ96L33 236 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 MIPEPQ99797 713 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 SPON2Q9BUD6 331 aa6.62□□□□□ -1.35
XRN1-213ENST00000489241 TPX2Q9ULW0 747 aaKnown RBP6.62□□□□□ -1.35
XRN1-213ENST00000489241 SUPT16HQ9Y5B9 1047 aaKnown RBP6.62□□□□□ -1.35
XRN1-213ENST00000489241 ROBO2Q9HCK4 1378 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 BPNT1O95861 308 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 ZNF865P0CJ78 1059 aaPredicted RBP6.61□□□□□ -1.35
XRN1-213ENST00000489241 SEPT6Q14141 434 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 NKG7Q16617 165 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 SFRP5Q5T4F7 317 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 ZNF746Q6NUN9 644 aaPredicted RBP6.61□□□□□ -1.35
XRN1-213ENST00000489241 KIAA0825Q8IV33 1275 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 HID1Q8IV36 788 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 MFSD4AQ8N468 514 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 PRDM7Q9NQW5 492 aa6.61□□□□□ -1.35
XRN1-213ENST00000489241 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
XRN1-213ENST00000489241 FAM155AB1AL88 458 aaPredicted RBP6.6□□□□□ -1.35
XRN1-213ENST00000489241 FBXL19Q6PCT2 694 aa6.6□□□□□ -1.35
XRN1-213ENST00000489241 BNC2Q6ZN30 1099 aaPredicted RBP6.6□□□□□ -1.35
XRN1-213ENST00000489241 GATAD2BQ8WXI9 593 aa6.6□□□□□ -1.35
XRN1-213ENST00000489241 GMLQ99445 158 aa6.6□□□□□ -1.35
XRN1-213ENST00000489241 NT5C1AQ9BXI3 368 aa6.6□□□□□ -1.35
XRN1-213ENST00000489241 KCNQ5Q9NR82 932 aa6.6□□□□□ -1.35
XRN1-213ENST00000489241 TACC3Q9Y6A5 838 aa6.6□□□□□ -1.35
XRN1-213ENST00000489241 PRR33A8MZF0 331 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 GREM1O60565 184 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 FARP2O94887 1054 aaPredicted RBP6.59□□□□□ -1.35
XRN1-213ENST00000489241 CST3P01034 146 aaPredicted RBP6.59□□□□□ -1.35
XRN1-213ENST00000489241 GARTP22102 1010 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 CDK8P49336 464 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 RPL6Q02878 288 aaKnown RBP6.59□□□□□ -1.35
XRN1-213ENST00000489241 GNL2Q13823 731 aaKnown RBP6.59□□□□□ -1.35
XRN1-213ENST00000489241 MPP2Q14168 576 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 ZNF648Q5T619 568 aaPredicted RBP6.59□□□□□ -1.35
XRN1-213ENST00000489241 PRAMEF13Q5VWM6 474 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 LETMD1Q6P1Q0 360 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 FAM196AQ6ZSG2 479 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 ZSWIM9Q86XI8 627 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 LMCD1Q9NZU5 365 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 ADAMTS1Q9UHI8 967 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 INPP5FQ9Y2H2 1132 aa6.59□□□□□ -1.35
XRN1-213ENST00000489241 CILPO75339 1184 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 F13A1P00488 732 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 GRK4P32298 578 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 KCNMB1Q16558 191 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 CWF19L2Q2TBE0 894 aaKnown RBP6.58□□□□□ -1.36
XRN1-213ENST00000489241 FAM177A1Q8N128 213 aaPredicted RBP6.58□□□□□ -1.36
XRN1-213ENST00000489241 DHX38Q92620 1227 aaKnown RBP6.58□□□□□ -1.36
XRN1-213ENST00000489241 COX4I2Q96KJ9 171 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 SPATA32Q96LK8 384 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 HSPA12BQ96MM6 686 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 SEMA3GQ9NS98 782 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 CTNND2Q9UQB3 1225 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 CAPN6Q9Y6Q1 641 aa6.58□□□□□ -1.36
XRN1-213ENST00000489241 FAM221AA4D161 298 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 GFRA2O00451 464 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 ATP2B1P20020 1258 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 DNAJA1P31689 397 aaKnown RBP6.57□□□□□ -1.36
XRN1-213ENST00000489241 ARID5AQ03989 594 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 CDKAL1Q5VV42 579 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 THAP5Q7Z6K1 395 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 VPS37DQ86XT2 251 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 NKD1Q969G9 470 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 DNAJC2Q99543 621 aaKnown RBP6.57□□□□□ -1.36
XRN1-213ENST00000489241 CARS2Q9HA77 564 aaKnown RBP6.57□□□□□ -1.36
XRN1-213ENST00000489241 ATP13A1Q9HD20 1204 aa6.57□□□□□ -1.36
XRN1-213ENST00000489241 CNTNAP4Q9C0A0 1308 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 H3BS24 57 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 CYP7A1P22680 504 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 PDE4BQ07343 736 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 APOBRQ0VD83 1088 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 PAK2Q13177 524 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 PKN1Q16512 942 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 DPH6Q7L8W6 267 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 MRPL41Q8IXM3 137 aaKnown RBP6.56□□□□□ -1.36
XRN1-213ENST00000489241 EAF1Q96JC9 268 aaPredicted RBP6.56□□□□□ -1.36
XRN1-213ENST00000489241 ST14Q9Y5Y6 855 aa6.56□□□□□ -1.36
XRN1-213ENST00000489241 TLR3O15455 904 aaKnown RBP6.55□□□□□ -1.36
XRN1-213ENST00000489241 PGRP06401 933 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 GTF2F1P35269 517 aaKnown RBP eCLIP6.55□□□□□ -1.36
XRN1-213ENST00000489241 KIR3DL1P43629 444 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 AFMP43652 599 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 GJA8P48165 433 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 XAGE3Q8WTP9 111 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 ARMC5Q96C12 935 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 GPRASP2Q96D09 838 aa6.55□□□□□ -1.36
XRN1-213ENST00000489241 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms