RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 FUT4P22083 530 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 PLCL1Q15111 1095 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 ZNF792Q3KQV3 632 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 MFSD4AQ8N468 514 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 FAM13CQ8NE31 585 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 ZNF296Q8WUU4 475 aaPredicted RBP4.39□□□□□ -1.71
CALD1-221ENST00000489019 HSPA12BQ96MM6 686 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 LRRC3Q9BY71 257 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 SEMA3GQ9NS98 782 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 UBP1Q9NZI7 540 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 SUPT16HQ9Y5B9 1047 aaKnown RBP4.39□□□□□ -1.71
CALD1-221ENST00000489019 ST14Q9Y5Y6 855 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 CAPN6Q9Y6Q1 641 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 PITPNM2Q9BZ72 1349 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 RNASE1P07998 156 aaKnown RBP4.38□□□□□ -1.71
CALD1-221ENST00000489019 CLCN7P51798 805 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 TNK2Q07912 1038 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 ZNF394Q53GI3 561 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 CDKAL1Q5VV42 579 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 ZNF746Q6NUN9 644 aaPredicted RBP4.38□□□□□ -1.71
CALD1-221ENST00000489019 SLFN12Q8IYM2 578 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 CYB5D2Q8WUJ1 264 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 Q96M66 194 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 BRMS1Q9HCU9 246 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 PRDM7Q9NQW5 492 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 MBNL3Q9NUK0 354 aaKnown RBP4.38□□□□□ -1.71
CALD1-221ENST00000489019 KLHL3Q9UH77 587 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 CEP131Q9UPN4 1083 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 ROBO2Q9HCK4 1378 aa4.38□□□□□ -1.71
CALD1-221ENST00000489019 BAZ1BQ9UIG0 1483 aaKnown RBP4.37□□□□□ -1.71
CALD1-221ENST00000489019 H3BS24 57 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 ZNF76P36508 570 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 YARSP54577 528 aaKnown RBP4.37□□□□□ -1.71
CALD1-221ENST00000489019 CWF19L2Q2TBE0 894 aaKnown RBP4.37□□□□□ -1.71
CALD1-221ENST00000489019 DIEXFQ68CQ4 756 aaKnown RBP4.37□□□□□ -1.71
CALD1-221ENST00000489019 RGS22Q8NE09 1264 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 BAHD1Q8TBE0 780 aaPredicted RBP4.37□□□□□ -1.71
CALD1-221ENST00000489019 ASB11Q8WXH4 323 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 EAF1Q96JC9 268 aaPredicted RBP4.37□□□□□ -1.71
CALD1-221ENST00000489019 BCL11AQ9H165 835 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 ATP13A1Q9HD20 1204 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 PCDHB14Q9Y5E9 798 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 PCDHGB7Q9Y5F8 929 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 ATAD2BQ9ULI0 1458 aa4.37□□□□□ -1.71
CALD1-221ENST00000489019 EIF4G1Q04637 1599 aaKnown RBP4.36□□□□□ -1.71
CALD1-221ENST00000489019 ABCC8Q09428 1581 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 UNCXA6NJT0 531 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 SLC22A31A6NKX4 558 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 WASH4PA8MWX3 477 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 FAM155AB1AL88 458 aaPredicted RBP4.36□□□□□ -1.71
CALD1-221ENST00000489019 ATE1O95260 518 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 CYP7A1P22680 504 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 VAMP1P23763 118 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 KIR3DL1P43629 444 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 RACK1P63244 317 aaKnown RBP4.36□□□□□ -1.71
CALD1-221ENST00000489019 CLCQ05315 142 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 IKZF1Q13422 519 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 SEZ6Q53EL9 994 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 ANGEL2Q5VTE6 544 aaKnown RBP4.36□□□□□ -1.71
CALD1-221ENST00000489019 USP48Q86UV5 1035 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 COX4I2Q96KJ9 171 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 PEG3Q9GZU2 1588 aa4.36□□□□□ -1.71
CALD1-221ENST00000489019 LRRN2O75325 713 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 PAPLNO95428 1278 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 ITGB5P18084 799 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 ETV3P41162 512 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 ZP2Q05996 745 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 APOBRQ0VD83 1088 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 GK5Q6ZS86 529 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 METTL16Q86W50 562 aaKnown RBP4.35□□□□□ -1.71
CALD1-221ENST00000489019 SLITRK4Q8IW52 837 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 LRRN4CLQ8ND94 238 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 PI4K2BQ8TCG2 481 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 UBE2FQ969M7 185 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 VWCEQ96DN2 955 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 MRRFQ96E11 262 aaKnown RBP4.35□□□□□ -1.71
CALD1-221ENST00000489019 CCDC74BQ96LY2 380 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 KIF2CQ99661 725 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 SPON2Q9BUD6 331 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 NT5C1AQ9BXI3 368 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 ANTXR1Q9H6X2 564 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 EHMT1Q9H9B1 1298 aa4.35□□□□□ -1.71
CALD1-221ENST00000489019 RC3H2Q9HBD1 1191 aaKnown RBP4.35□□□□□ -1.71
CALD1-221ENST00000489019 METTL5Q9NRN9 209 aaKnown RBP4.35□□□□□ -1.71
CALD1-221ENST00000489019 KIAA1522Q9P206 1035 aaPredicted RBP4.35□□□□□ -1.71
CALD1-221ENST00000489019 UBOX5O94941 541 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 ARSHQ5FYA8 562 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 OVOS1Q6IE37 1185 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 SLC23A3Q6PIS1 610 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 THAP5Q7Z6K1 395 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 KIAA0825Q8IV33 1275 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 PHACTR4Q8IZ21 702 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 REXO1Q8N1G1 1221 aaKnown RBP4.34□□□□□ -1.71
CALD1-221ENST00000489019 DTWD2Q8NBA8 298 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 RNF34Q969K3 372 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 KREMEN1Q96MU8 473 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 DUSP15Q9H1R2 295 aaPredicted RBP4.34□□□□□ -1.71
CALD1-221ENST00000489019 CARS2Q9HA77 564 aaKnown RBP4.34□□□□□ -1.71
CALD1-221ENST00000489019 GMIPQ9P107 970 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms