RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 USP17L18D6R9N7 530 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 USP17L22D6RA61 530 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 USP17L17D6RBQ6 530 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 USP17L19D6RCP7 530 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 USP17L20D6RJB6 530 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
YIPF3-207ENST00000488966 USP5P45974 858 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 ATP8B2P98198 1209 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 USP17L24Q0WX57 530 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 TATDN1Q6P1N9 297 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 EDC3Q96F86 508 aaKnown RBP13.17□□□□□ -0.3
YIPF3-207ENST00000488966 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 IGSF3O75054 1194 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
YIPF3-207ENST00000488966 VCAM1P19320 739 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 PTPREP23469 700 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 CCNA1P78396 465 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 MFSD14CQ5VZR4 134 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 CATSPERGQ6ZRH7 1159 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 MAGEB6Q8N7X4 407 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 SENP6Q9GZR1 1112 aaPredicted RBP13.16□□□□□ -0.3
YIPF3-207ENST00000488966 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 CCDC8Q9H0W5 538 aaPredicted RBP13.16□□□□□ -0.3
YIPF3-207ENST00000488966 BTBD7Q9P203 1132 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
YIPF3-207ENST00000488966 NOP58Q9Y2X3 529 aaKnown RBP13.16□□□□□ -0.3
YIPF3-207ENST00000488966 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.3
YIPF3-207ENST00000488966 SLC15A5A6NIM6 579 aa13.15□□□□□ -0.3
YIPF3-207ENST00000488966 HOXC6P09630 235 aa13.15□□□□□ -0.3
YIPF3-207ENST00000488966 CERKLQ49MI3 558 aaPredicted RBP13.15□□□□□ -0.3
YIPF3-207ENST00000488966 NPLOC4Q8TAT6 608 aa13.15□□□□□ -0.3
YIPF3-207ENST00000488966 EAF2Q96CJ1 260 aaPredicted RBP13.15□□□□□ -0.3
YIPF3-207ENST00000488966 EHD4Q9H223 541 aa13.15□□□□□ -0.3
YIPF3-207ENST00000488966 ANTXR1Q9H6X2 564 aa13.15□□□□□ -0.3
YIPF3-207ENST00000488966 DDX20Q9UHI6 824 aaKnown RBP13.15□□□□□ -0.3
YIPF3-207ENST00000488966 CNGA1P29973 690 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 CYP2C19P33261 490 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 GUCY1A2P33402 732 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 SHMT1P34896 483 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 PLCD1P51178 756 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 ATN1P54259 1190 aaPredicted RBP13.14□□□□□ -0.31
YIPF3-207ENST00000488966 USP14P54578 494 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 ATP2B2Q01814 1243 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 GRB14Q14449 540 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 ABCB5Q2M3G0 1257 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 LBX2Q6XYB7 198 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 TRPV1Q8NER1 839 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 LPAR1Q92633 364 aa13.14□□□□□ -0.31
YIPF3-207ENST00000488966 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
YIPF3-207ENST00000488966 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
YIPF3-207ENST00000488966 SPDYE16A6NNV3 312 aaPredicted RBP13.13□□□□□ -0.31
YIPF3-207ENST00000488966 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
YIPF3-207ENST00000488966 IGHA2P01877 340 aa13.13□□□□□ -0.31
YIPF3-207ENST00000488966 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
YIPF3-207ENST00000488966 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
YIPF3-207ENST00000488966 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
YIPF3-207ENST00000488966 DNM1LO00429 736 aa13.12□□□□□ -0.31
YIPF3-207ENST00000488966 MSCO60682 206 aa13.12□□□□□ -0.31
YIPF3-207ENST00000488966 EVX2Q03828 476 aa13.12□□□□□ -0.31
YIPF3-207ENST00000488966 MAP3K12Q12852 859 aa13.12□□□□□ -0.31
YIPF3-207ENST00000488966 SEPT2Q15019 361 aa13.12□□□□□ -0.31
YIPF3-207ENST00000488966 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
YIPF3-207ENST00000488966 FAM161BQ96MY7 647 aa13.12□□□□□ -0.31
YIPF3-207ENST00000488966 GUCD1Q96NT3 240 aa13.12□□□□□ -0.31
YIPF3-207ENST00000488966 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
YIPF3-207ENST00000488966 CABP5Q9NP86 173 aa13.12□□□□□ -0.31
YIPF3-207ENST00000488966 CDK5RAP2Q96SN8 1893 aa13.11□□□□□ -0.31
YIPF3-207ENST00000488966 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
YIPF3-207ENST00000488966 CYBAP13498 195 aa13.11□□□□□ -0.31
YIPF3-207ENST00000488966 RTP1P59025 263 aa13.11□□□□□ -0.31
YIPF3-207ENST00000488966 GABPAQ06546 454 aa13.11□□□□□ -0.31
YIPF3-207ENST00000488966 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
YIPF3-207ENST00000488966 MOV10L1Q9BXT6 1211 aaKnown RBP13.11□□□□□ -0.31
YIPF3-207ENST00000488966 FOCADQ5VW36 1801 aa13.11□□□□□ -0.31
YIPF3-207ENST00000488966 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
YIPF3-207ENST00000488966 POLR3DP05423 398 aaPredicted RBP13.1□□□□□ -0.31
YIPF3-207ENST00000488966 RLBP1P12271 317 aa13.1□□□□□ -0.31
YIPF3-207ENST00000488966 ADORA2AP29274 412 aa13.1□□□□□ -0.31
YIPF3-207ENST00000488966 COG2Q14746 738 aa13.1□□□□□ -0.31
YIPF3-207ENST00000488966 GJC2Q5T442 439 aaPredicted RBP13.1□□□□□ -0.31
YIPF3-207ENST00000488966 DPP9Q86TI2 863 aa13.1□□□□□ -0.31
YIPF3-207ENST00000488966 AACSQ86V21 672 aa13.1□□□□□ -0.31
YIPF3-207ENST00000488966 ITPRIPQ8IWB1 547 aa13.1□□□□□ -0.31
YIPF3-207ENST00000488966 COL25A1Q9BXS0 654 aaPredicted RBP13.1□□□□□ -0.31
YIPF3-207ENST00000488966 A0A0C4DFX4 3053 aa13.1□□□□□ -0.31
YIPF3-207ENST00000488966 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 COBLO75128 1261 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 ERCC3P19447 782 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 PRAMEF19Q5SWL8 479 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 OLFML2BQ68BL8 750 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 TMED8Q6PL24 325 aaPredicted RBP13.09□□□□□ -0.31
YIPF3-207ENST00000488966 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
YIPF3-207ENST00000488966 ARRDC4Q8NCT1 418 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 SPATC1LQ9H0A9 340 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms