RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 USP17L12C9JPN9 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L21D6R901 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 SLC34A2O95436 690 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 GJA8P48165 433 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP14P54578 494 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 Q3C1V9 767 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 NKX2-3Q8TAU0 364 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 SHISA4Q96DD7 197 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 GPATCH3Q96I76 525 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 C12orf42Q96LP6 360 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 PAGR1Q9BTK6 254 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 PUS7LQ9H0K6 701 aaKnown RBP14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 SLC4A4Q9Y6R1 1079 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 ATAD5Q96QE3 1844 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 LOC285556D6RIA3 1793 aa14.37□□□□□ -0.11
CCHCR1-215ENST00000488920 C12orf60Q5U649 245 aa14.37□□□□□ -0.11
CCHCR1-215ENST00000488920 CATSPERGQ6ZRH7 1159 aa14.37□□□□□ -0.11
CCHCR1-215ENST00000488920 DDRGK1Q96HY6 314 aa14.37□□□□□ -0.11
CCHCR1-215ENST00000488920 SWAP70Q9UH65 585 aa14.37□□□□□ -0.11
CCHCR1-215ENST00000488920 A0A1W2PRG0 241 aa14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 VCAM1P19320 739 aa14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 ERVK-9P63128 1117 aa14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 ERVK-24P63145 666 aa14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 CCAR1Q8IX12 1150 aaKnown RBP14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 KBTBD3Q8NAB2 608 aa14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 STRBPQ96SI9 672 aaKnown RBP14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 CRBNQ96SW2 442 aa14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 PORCNQ9H237 461 aa14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 MYH1P12882 1939 aa14.36□□□□□ -0.11
CCHCR1-215ENST00000488920 SGPL1O95470 568 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 TFRCP02786 760 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 AKR1B1P15121 316 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 CYP2B6P20813 491 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 MAPK4P31152 587 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 CDK8P49336 464 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 TMEM179Q6ZVK1 233 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 SIAH1Q8IUQ4 282 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 AMOTL1Q8IY63 956 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 GTF3C2Q8WUA4 911 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 OSBP2Q969R2 916 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 DEFB118Q96PH6 123 aa14.35□□□□□ -0.11
CCHCR1-215ENST00000488920 RNF113AO15541 343 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-215ENST00000488920 CNMDO75829 334 aa14.34□□□□□ -0.11
CCHCR1-215ENST00000488920 TRIM32Q13049 653 aa14.34□□□□□ -0.11
CCHCR1-215ENST00000488920 KIAA1755Q5JYT7 1200 aa14.34□□□□□ -0.11
CCHCR1-215ENST00000488920 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
CCHCR1-215ENST00000488920 NUDT12Q9BQG2 462 aa14.34□□□□□ -0.11
CCHCR1-215ENST00000488920 RABGAP1Q9Y3P9 1069 aa14.34□□□□□ -0.11
CCHCR1-215ENST00000488920 RBBP6Q7Z6E9 1792 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-215ENST00000488920 HMGCRP04035 888 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 C16orf86Q6ZW13 317 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 GPR142Q7Z601 462 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 PLEKHH3Q7Z736 793 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 UBE2Q1Q7Z7E8 422 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 STK11IPQ8N1F8 1099 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 APPBP2Q92624 585 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 DPF3Q92784 378 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 CCDC17Q96LX7 622 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 CWC22Q9HCG8 908 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 PAK6Q9NQU5 681 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 BTBD7Q9P203 1132 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 MGAMO43451 1857 aa14.33□□□□□ -0.12
CCHCR1-215ENST00000488920 SPDYE16A6NNV3 312 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 GSG1L2A8MUP6 293 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 ERC2O15083 957 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 FARP2O94887 1054 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 ZFYP08048 801 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 ICA1Q05084 483 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 MORN1Q5T089 497 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 ANKRD45Q5TZF3 282 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 SPICE1Q8N0Z3 855 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 PI4K2BQ8TCG2 481 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 SOCS4Q8WXH5 440 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 TRIB2Q92519 343 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 ARHGEF10LQ9HCE6 1279 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 TTC41PQ6P2S7 1318 aa14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 DDX60LQ5H9U9 1706 aaKnown RBP14.32□□□□□ -0.12
CCHCR1-215ENST00000488920 MINDY4BA8MYZ0 360 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 H0YGN5 161 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 M0R2C6 588 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 GLRX3O76003 335 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 XRCC5P13010 732 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 CCNA1P78396 465 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 ATP2B2Q01814 1243 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 COG2Q14746 738 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms