RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 USP17L19D6RCP7 530 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 USP17L20D6RJB6 530 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 GOLIM4O00461 696 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 SHMT1P34896 483 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 USP17L24Q0WX57 530 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 Q3C1V9 767 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 ANKLE1Q8NAG6 615 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 TRIB2Q92519 343 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 DNAJC2Q99543 621 aaKnown RBP31.49■■■□□ 2.63
RNF220-216ENST00000488865 ZNF532Q9HCE3 1301 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 CYP2B6P20813 491 aa31.48■■■□□ 2.63
RNF220-216ENST00000488865 GABPAQ06546 454 aa31.48■■■□□ 2.63
RNF220-216ENST00000488865 TRIM32Q13049 653 aa31.48■■■□□ 2.63
RNF220-216ENST00000488865 PDE3AQ14432 1141 aa31.48■■■□□ 2.63
RNF220-216ENST00000488865 POTEEQ6S8J3 1075 aa31.48■■■□□ 2.63
RNF220-216ENST00000488865 CCAR1Q8IX12 1150 aaKnown RBP31.48■■■□□ 2.63
RNF220-216ENST00000488865 TRMT44Q8IYL2 757 aaKnown RBP31.48■■■□□ 2.63
RNF220-216ENST00000488865 PAGR1Q9BTK6 254 aa31.48■■■□□ 2.63
RNF220-216ENST00000488865 NAV1Q8NEY1 1877 aa31.48■■■□□ 2.63
RNF220-216ENST00000488865 TCRBV5S4A2TA0A5A2 114 aa31.47■■■□□ 2.63
RNF220-216ENST00000488865 ZYXQ15942 572 aaKnown RBP31.47■■■□□ 2.63
RNF220-216ENST00000488865 NECAB2Q7Z6G3 386 aa31.47■■■□□ 2.63
RNF220-216ENST00000488865 PAWRQ96IZ0 340 aaKnown RBP31.47■■■□□ 2.63
RNF220-216ENST00000488865 PORCNQ9H237 461 aa31.47■■■□□ 2.63
RNF220-216ENST00000488865 RABGAP1Q9Y3P9 1069 aa31.47■■■□□ 2.63
RNF220-216ENST00000488865 RANBP2P49792 3224 aaKnown RBP31.46■■■□□ 2.63
RNF220-216ENST00000488865 MAP3K21Q5TCX8 1036 aa31.46■■■□□ 2.63
RNF220-216ENST00000488865 CATSPERGQ6ZRH7 1159 aa31.46■■■□□ 2.63
RNF220-216ENST00000488865 GPR142Q7Z601 462 aa31.46■■■□□ 2.63
RNF220-216ENST00000488865 ACER1Q8TDN7 264 aa31.46■■■□□ 2.63
RNF220-216ENST00000488865 USP6NLQ92738 828 aa31.46■■■□□ 2.63
RNF220-216ENST00000488865 MCM9Q9NXL9 1143 aa31.46■■■□□ 2.63
RNF220-216ENST00000488865 TRIOBPQ9H2D6 2365 aa31.46■■■□□ 2.63
RNF220-216ENST00000488865 EVI5O60447 810 aa31.45■■■□□ 2.63
RNF220-216ENST00000488865 MORN1Q5T089 497 aa31.45■■■□□ 2.63
RNF220-216ENST00000488865 PLEKHH3Q7Z736 793 aa31.45■■■□□ 2.63
RNF220-216ENST00000488865 RCAN3Q9UKA8 241 aa31.45■■■□□ 2.63
RNF220-216ENST00000488865 VCAM1P19320 739 aa31.44■■■□□ 2.62
RNF220-216ENST00000488865 GUCY1A2P33402 732 aa31.44■■■□□ 2.62
RNF220-216ENST00000488865 LBX2Q6XYB7 198 aa31.44■■■□□ 2.62
RNF220-216ENST00000488865 DCP1AQ9NPI6 582 aaPredicted RBP31.44■■■□□ 2.62
RNF220-216ENST00000488865 PAG1Q9NWQ8 432 aa31.44■■■□□ 2.62
RNF220-216ENST00000488865 RBM27Q9P2N5 1060 aaKnown RBP31.44■■■□□ 2.62
RNF220-216ENST00000488865 ATP5JP18859 108 aa31.43■■■□□ 2.62
RNF220-216ENST00000488865 RGS2P41220 211 aa31.43■■■□□ 2.62
RNF220-216ENST00000488865 CCNA1P78396 465 aa31.43■■■□□ 2.62
RNF220-216ENST00000488865 LCORLQ8N3X6 602 aa31.43■■■□□ 2.62
RNF220-216ENST00000488865 PRO3102Q9H379 93 aa31.43■■■□□ 2.62
RNF220-216ENST00000488865 CNMDO75829 334 aa31.42■■■□□ 2.62
RNF220-216ENST00000488865 PRKAR2AP13861 404 aaKnown RBP31.42■■■□□ 2.62
RNF220-216ENST00000488865 ZKSCAN1P17029 563 aaPredicted RBP31.42■■■□□ 2.62
RNF220-216ENST00000488865 DIS3LQ8TF46 1054 aaKnown RBP31.42■■■□□ 2.62
RNF220-216ENST00000488865 SDR42E1Q8WUS8 393 aa31.42■■■□□ 2.62
RNF220-216ENST00000488865 EDC3Q96F86 508 aaKnown RBP31.42■■■□□ 2.62
RNF220-216ENST00000488865 OGDHLQ9ULD0 1010 aa31.42■■■□□ 2.62
RNF220-216ENST00000488865 SEPT2Q15019 361 aa31.41■■■□□ 2.62
RNF220-216ENST00000488865 GLRX3O76003 335 aaKnown RBP31.4■■■□□ 2.62
RNF220-216ENST00000488865 ADD2P35612 726 aa31.4■■■□□ 2.62
RNF220-216ENST00000488865 APBA2Q99767 749 aa31.4■■■□□ 2.62
RNF220-216ENST00000488865 HAUS7Q99871 368 aa31.4■■■□□ 2.62
RNF220-216ENST00000488865 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.4■■■□□ 2.62
RNF220-216ENST00000488865 BCL11AQ9H165 835 aa31.4■■■□□ 2.62
RNF220-216ENST00000488865 BOLA2Q9H3K6 86 aa31.4■■■□□ 2.62
RNF220-216ENST00000488865 CWC22Q9HCG8 908 aaKnown RBP31.4■■■□□ 2.62
RNF220-216ENST00000488865 SWAP70Q9UH65 585 aa31.4■■■□□ 2.62
RNF220-216ENST00000488865 EVX2Q03828 476 aa31.39■■■□□ 2.62
RNF220-216ENST00000488865 NBPF3Q9H094 633 aa31.39■■■□□ 2.62
RNF220-216ENST00000488865 RPAP3Q9H6T3 665 aaPredicted RBP31.39■■■□□ 2.62
RNF220-216ENST00000488865 ARMT1Q9H993 441 aa31.39■■■□□ 2.62
RNF220-216ENST00000488865 ATP8A2Q9NTI2 1148 aa31.39■■■□□ 2.62
RNF220-216ENST00000488865 MPHOSPH10O00566 681 aaKnown RBP31.38■■■□□ 2.61
RNF220-216ENST00000488865 MNX1P50219 401 aaPredicted RBP31.38■■■□□ 2.61
RNF220-216ENST00000488865 CACNB2Q08289 660 aaPredicted RBP31.38■■■□□ 2.61
RNF220-216ENST00000488865 MAP2K5Q13163 448 aa31.37■■■□□ 2.61
RNF220-216ENST00000488865 ALPK3Q96L96 1907 aa31.36■■■□□ 2.61
RNF220-216ENST00000488865 SPDYE16A6NNV3 312 aaPredicted RBP31.36■■■□□ 2.61
RNF220-216ENST00000488865 MBD4O95243 580 aa31.36■■■□□ 2.61
RNF220-216ENST00000488865 CCL14Q16627 93 aa31.36■■■□□ 2.61
RNF220-216ENST00000488865 TMEM179Q6ZVK1 233 aa31.36■■■□□ 2.61
RNF220-216ENST00000488865 BTBD7Q9P203 1132 aa31.36■■■□□ 2.61
RNF220-216ENST00000488865 A0A1W2PRG0 241 aa31.35■■■□□ 2.61
RNF220-216ENST00000488865 SLC15A5A6NIM6 579 aa31.35■■■□□ 2.61
RNF220-216ENST00000488865 CYP2D6P10635 497 aa31.35■■■□□ 2.61
RNF220-216ENST00000488865 PTPREP23469 700 aa31.35■■■□□ 2.61
RNF220-216ENST00000488865 UBE3CQ15386 1083 aa31.35■■■□□ 2.61
RNF220-216ENST00000488865 LRRCC1Q9C099 1032 aa31.35■■■□□ 2.61
RNF220-216ENST00000488865 C11orf49Q9H6J7 331 aa31.35■■■□□ 2.61
RNF220-216ENST00000488865 A0A1W2PPC1 479 aa31.34■■■□□ 2.61
RNF220-216ENST00000488865 PRKAB2O43741 272 aa31.34■■■□□ 2.61
RNF220-216ENST00000488865 SLC44A5Q8NCS7 719 aa31.34■■■□□ 2.61
RNF220-216ENST00000488865 HOXC10Q9NYD6 342 aa31.34■■■□□ 2.61
RNF220-216ENST00000488865 COG2Q14746 738 aa31.33■■■□□ 2.61
RNF220-216ENST00000488865 SLFNL1Q499Z3 407 aa31.33■■■□□ 2.61
RNF220-216ENST00000488865 WDR78Q5VTH9 848 aa31.33■■■□□ 2.61
RNF220-216ENST00000488865 DYNLL2Q96FJ2 89 aa31.33■■■□□ 2.61
RNF220-216ENST00000488865 IVNS1ABPQ9Y6Y0 642 aa31.33■■■□□ 2.61
RNF220-216ENST00000488865 SZT2Q5T011 3432 aa31.33■■■□□ 2.61
RNF220-216ENST00000488865 C20orf194Q5TEA3 1177 aa31.32■■■□□ 2.6
RNF220-216ENST00000488865 HOXC6P09630 235 aa31.31■■■□□ 2.6
RNF220-216ENST00000488865 CCND3P30281 292 aaPredicted RBP31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms