RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 E7EWF7 191 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 RANBP6O60518 1105 aaKnown RBP22.79■■□□□ 1.24
CCM2-216ENST00000488727 SLC10A3P09131 477 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 MCM2P49736 904 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 CLEC17AQ6ZS10 378 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 TMEM179Q6ZVK1 233 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 PAXIP1Q6ZW49 1069 aaPredicted RBP22.79■■□□□ 1.24
CCM2-216ENST00000488727 CLEC10AQ8IUN9 316 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 GINM1Q9NU53 330 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 ZHX2Q9Y6X8 837 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 PTPRFP10586 1907 aa22.78■■□□□ 1.24
CCM2-216ENST00000488727 TFAP4Q01664 338 aa22.78■■□□□ 1.24
CCM2-216ENST00000488727 PLIN4Q96Q06 1357 aa22.78■■□□□ 1.24
CCM2-216ENST00000488727 B4E1Z4 1266 aa22.77■■□□□ 1.24
CCM2-216ENST00000488727 TSPY3P0CV98 308 aa22.77■■□□□ 1.24
CCM2-216ENST00000488727 TSPY8P0CW00 308 aa22.77■■□□□ 1.24
CCM2-216ENST00000488727 PPATQ06203 517 aa22.77■■□□□ 1.24
CCM2-216ENST00000488727 MKRN3Q13064 507 aaKnown RBP22.77■■□□□ 1.24
CCM2-216ENST00000488727 GRM1Q13255 1194 aa22.77■■□□□ 1.24
CCM2-216ENST00000488727 RNF20Q5VTR2 975 aa22.77■■□□□ 1.24
CCM2-216ENST00000488727 SPRYD7Q5W111 196 aa22.77■■□□□ 1.24
CCM2-216ENST00000488727 KCNB2Q92953 911 aa22.77■■□□□ 1.24
CCM2-216ENST00000488727 CWC22Q9HCG8 908 aaKnown RBP22.77■■□□□ 1.24
CCM2-216ENST00000488727 TSPY2A6NKD2 308 aa22.77■■□□□ 1.23
CCM2-216ENST00000488727 USP17L5A8MUK1 530 aa22.77■■□□□ 1.23
CCM2-216ENST00000488727 IRF6O14896 467 aa22.77■■□□□ 1.23
CCM2-216ENST00000488727 NEDD1Q8NHV4 660 aa22.77■■□□□ 1.23
CCM2-216ENST00000488727 CAPNS2Q96L46 248 aa22.77■■□□□ 1.23
CCM2-216ENST00000488727 CEP350Q5VT06 3117 aa22.76■■□□□ 1.23
CCM2-216ENST00000488727 IGKV6D-41A0A0C4DH26 115 aa22.76■■□□□ 1.23
CCM2-216ENST00000488727 KDM4AO75164 1064 aa22.76■■□□□ 1.23
CCM2-216ENST00000488727 PPIL2Q13356 520 aa22.76■■□□□ 1.23
CCM2-216ENST00000488727 COL9A3Q14050 684 aaPredicted RBP22.76■■□□□ 1.23
CCM2-216ENST00000488727 CCDC102AQ96A19 550 aa22.76■■□□□ 1.23
CCM2-216ENST00000488727 CNNM2Q9H8M5 875 aa22.76■■□□□ 1.23
CCM2-216ENST00000488727 AFG3L2Q9Y4W6 797 aa22.76■■□□□ 1.23
CCM2-216ENST00000488727 NMT2O60551 498 aa22.75■■□□□ 1.23
CCM2-216ENST00000488727 ZBTB48P10074 688 aaPredicted RBP22.75■■□□□ 1.23
CCM2-216ENST00000488727 TSGA10IPQ3SY00 556 aa22.75■■□□□ 1.23
CCM2-216ENST00000488727 SIAH1Q8IUQ4 282 aa22.75■■□□□ 1.23
CCM2-216ENST00000488727 ESR2Q92731 530 aa22.75■■□□□ 1.23
CCM2-216ENST00000488727 KRT23Q9C075 422 aa22.75■■□□□ 1.23
CCM2-216ENST00000488727 IL17RBQ9NRM6 502 aa22.75■■□□□ 1.23
CCM2-216ENST00000488727 FOXD4L1Q9NU39 408 aa22.75■■□□□ 1.23
CCM2-216ENST00000488727 MYH4Q9Y623 1939 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 VEGFBP49765 207 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 NUCB2P80303 420 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 ADCK5Q3MIX3 580 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 ZIC5Q96T25 663 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 SNX14Q9Y5W7 946 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 TRIM75PA6NK02 468 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 TRAK2O60296 914 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 ICA1Q05084 483 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 SPP2Q13103 211 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 NCOA7Q8NI08 942 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 ACER1Q8TDN7 264 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 CEP95Q96GE4 821 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 WDR18Q9BV38 432 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 KANSL2Q9H9L4 492 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 ZSWIM5Q9P217 1185 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 KCNH4Q9UQ05 1017 aa22.74■■□□□ 1.23
CCM2-216ENST00000488727 ZKSCAN1P17029 563 aaPredicted RBP22.73■■□□□ 1.23
CCM2-216ENST00000488727 ECE1P42892 770 aa22.73■■□□□ 1.23
CCM2-216ENST00000488727 TRDNQ13061 729 aa22.73■■□□□ 1.23
CCM2-216ENST00000488727 CYB5R4Q7L1T6 521 aa22.73■■□□□ 1.23
CCM2-216ENST00000488727 MB21D2Q8IYB1 491 aaPredicted RBP22.73■■□□□ 1.23
CCM2-216ENST00000488727 ZNF280CQ8ND82 737 aa22.73■■□□□ 1.23
CCM2-216ENST00000488727 AS3MTQ9HBK9 375 aa22.73■■□□□ 1.23
CCM2-216ENST00000488727 WDR33Q9C0J8 1336 aaKnown RBP22.72■■□□□ 1.23
CCM2-216ENST00000488727 THSD7BQ9C0I4 1608 aa22.72■■□□□ 1.23
CCM2-216ENST00000488727 A0A1W2PRG0 241 aa22.72■■□□□ 1.23
CCM2-216ENST00000488727 AOC2O75106 756 aa22.72■■□□□ 1.23
CCM2-216ENST00000488727 MS4A4AQ96JQ5 239 aa22.72■■□□□ 1.23
CCM2-216ENST00000488727 ZKSCAN3Q9BRR0 538 aa22.72■■□□□ 1.23
CCM2-216ENST00000488727 MTMR4Q9NYA4 1195 aa22.72■■□□□ 1.23
CCM2-216ENST00000488727 EEF2P13639 858 aaKnown RBP22.71■■□□□ 1.23
CCM2-216ENST00000488727 NEK4P51957 841 aa22.71■■□□□ 1.23
CCM2-216ENST00000488727 RALYLQ86SE5 291 aaKnown RBP22.71■■□□□ 1.23
CCM2-216ENST00000488727 NT5C2P49902 561 aa22.71■■□□□ 1.23
CCM2-216ENST00000488727 DGKZQ13574 1117 aa22.71■■□□□ 1.23
CCM2-216ENST00000488727 MTMR2Q13614 643 aa22.71■■□□□ 1.23
CCM2-216ENST00000488727 TCP11L1Q9NUJ3 509 aa22.71■■□□□ 1.23
CCM2-216ENST00000488727 LOC285556D6RIA3 1793 aa22.7■■□□□ 1.22
CCM2-216ENST00000488727 CXCL11O14625 94 aa22.7■■□□□ 1.22
CCM2-216ENST00000488727 ANTXR2P58335 489 aa22.7■■□□□ 1.22
CCM2-216ENST00000488727 NOGQ13253 232 aa22.7■■□□□ 1.22
CCM2-216ENST00000488727 DNAJC5GQ8N7S2 189 aa22.7■■□□□ 1.22
CCM2-216ENST00000488727 NYAP2Q9P242 653 aa22.7■■□□□ 1.22
CCM2-216ENST00000488727 USP17L10C9JJH3 530 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 NOVP48745 357 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 BACE1P56817 501 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 ATP2B2Q01814 1243 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 SNAPC2Q13487 334 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 CUL4AQ13619 759 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 KRT32Q14532 448 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 CHST3Q7LGC8 479 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 NEK1Q96PY6 1258 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 PCNTO95613 3336 aa22.69■■□□□ 1.22
CCM2-216ENST00000488727 A0A0G2JLL6 359 aaPredicted RBP22.68■■□□□ 1.22
CCM2-216ENST00000488727 GTF2A2P52657 109 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms