RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 SYNRGQ9UMZ2 1314 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 CASP2P42575 452 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 PTPROQ16827 1216 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
PKD1-220ENST00000487932 IGSF3O75054 1194 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 TTC38Q5R3I4 469 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 MIER3Q7Z3K6 550 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 BLZF1Q9H2G9 400 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 OTUD6AQ7L8S5 288 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 NCAPGQ9BPX3 1015 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 BCRP11274 1271 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 NME8Q8N427 588 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 RSRC1Q96IZ7 334 aaKnown RBP16.99■□□□□ 0.31
PKD1-220ENST00000487932 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
PKD1-220ENST00000487932 MYL5Q02045 173 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 HDXQ7Z353 690 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 DCPSQ96C86 337 aaKnown RBP16.99■□□□□ 0.31
PKD1-220ENST00000487932 DDX21Q9NR30 783 aaKnown RBP eCLIP16.99■□□□□ 0.31
PKD1-220ENST00000487932 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 PRKAG2Q9UGJ0 569 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 TTC41PQ6P2S7 1318 aa16.99■□□□□ 0.31
PKD1-220ENST00000487932 GBP1P32455 592 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 CYP26C1Q6V0L0 522 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 STAMQ92783 540 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 GTF2IP78347 998 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 LGSNQ5TDP6 509 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 DTNBO60941 627 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 XPAP23025 273 aaPredicted RBP16.98■□□□□ 0.31
PKD1-220ENST00000487932 PDE6BP35913 854 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 PAK1Q13153 545 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 MAP7Q14244 749 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 OTUD7BQ6GQQ9 843 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 SPATA17Q96L03 361 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 TAB2Q9NYJ8 693 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 PCDHB13Q9Y5F0 798 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 PALM2Q8IXS6 379 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 PHKBQ93100 1093 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 RABGAP1Q9Y3P9 1069 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 PDE8AO60658 829 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 VSIG1Q86XK7 387 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 NDUFB9Q9Y6M9 179 aa16.98■□□□□ 0.31
PKD1-220ENST00000487932 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 ANKRD42Q8N9B4 389 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 NAPGQ99747 312 aaPredicted RBP16.97■□□□□ 0.31
PKD1-220ENST00000487932 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 ARPP19P56211 112 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 MAGED2Q9UNF1 606 aaPredicted RBP16.97■□□□□ 0.31
PKD1-220ENST00000487932 GAS7O60861 476 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 CABP7Q86V35 215 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 C10orf67Q8IYJ2 551 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 NUCKS1Q9H1E3 243 aaKnown RBP16.97■□□□□ 0.31
PKD1-220ENST00000487932 AS3MTQ9HBK9 375 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 STAM2O75886 525 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 NONOQ15233 471 aaKnown RBP eCLIP16.97■□□□□ 0.31
PKD1-220ENST00000487932 LIG4P49917 911 aa16.97■□□□□ 0.31
PKD1-220ENST00000487932 FOXD4Q12950 439 aaPredicted RBP16.97■□□□□ 0.31
PKD1-220ENST00000487932 NSD2O96028 1365 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 SCNN1DP51172 638 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 USP21Q9UK80 565 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 KCNH3Q9ULD8 1083 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 MAP3K5Q99683 1374 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.31
PKD1-220ENST00000487932 KRT12Q99456 494 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 IFNB1P01574 187 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 EVCP57679 992 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.31
PKD1-220ENST00000487932 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
PKD1-220ENST00000487932 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 NCOA1Q15788 1441 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 BAG6P46379 1132 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 ABI1Q8IZP0 508 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
PKD1-220ENST00000487932 KLHL30Q0D2K2 578 aa16.96■□□□□ 0.3
PKD1-220ENST00000487932 ANKRD35Q8N283 1001 aa16.96■□□□□ 0.3
PKD1-220ENST00000487932 RNF217Q8TC41 542 aa16.96■□□□□ 0.3
PKD1-220ENST00000487932 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.3
PKD1-220ENST00000487932 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
PKD1-220ENST00000487932 BUB1BO60566 1050 aaPredicted RBP16.95■□□□□ 0.3
PKD1-220ENST00000487932 ABCB4P21439 1286 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 WHAMMQ8TF30 809 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 THRAP3Q9Y2W1 955 aaKnown RBP16.95■□□□□ 0.3
PKD1-220ENST00000487932 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 GPAA1O43292 621 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 GCP02774 474 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 AFAP1L1Q8TED9 768 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 PSPC1Q8WXF1 523 aaKnown RBP16.95■□□□□ 0.3
PKD1-220ENST00000487932 VCXQ9H320 206 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 FNDC3AQ9Y2H6 1198 aaKnown RBP16.95■□□□□ 0.3
PKD1-220ENST00000487932 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 IL16Q14005 1332 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 KIF14Q15058 1648 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 TNNC2P02585 160 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 GNL1P36915 607 aaPredicted RBP16.95■□□□□ 0.3
PKD1-220ENST00000487932 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 LRFN2Q9ULH4 789 aa16.95■□□□□ 0.3
PKD1-220ENST00000487932 GNPTABQ3T906 1256 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms