RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 ATP2B2Q01814 1243 aa23.21■■□□□ 1.31
SEC22A-208ENST00000487572 ICA1Q05084 483 aa23.21■■□□□ 1.31
SEC22A-208ENST00000487572 MOGSQ13724 837 aa23.21■■□□□ 1.31
SEC22A-208ENST00000487572 ZYXQ15942 572 aaKnown RBP23.21■■□□□ 1.31
SEC22A-208ENST00000487572 FAM43AQ8N2R8 423 aa23.21■■□□□ 1.31
SEC22A-208ENST00000487572 ACER1Q8TDN7 264 aa23.21■■□□□ 1.31
SEC22A-208ENST00000487572 U3KPZ7 1027 aaPredicted RBP23.21■■□□□ 1.31
SEC22A-208ENST00000487572 USP17L10C9JJH3 530 aa23.2■■□□□ 1.3
SEC22A-208ENST00000487572 FOXN1O15353 648 aa23.2■■□□□ 1.3
SEC22A-208ENST00000487572 RANBP6O60518 1105 aaKnown RBP23.2■■□□□ 1.3
SEC22A-208ENST00000487572 TSPY3P0CV98 308 aa23.2■■□□□ 1.3
SEC22A-208ENST00000487572 TSPY8P0CW00 308 aa23.2■■□□□ 1.3
SEC22A-208ENST00000487572 BACE1P56817 501 aa23.2■■□□□ 1.3
SEC22A-208ENST00000487572 AKNAD1Q5T1N1 836 aa23.2■■□□□ 1.3
SEC22A-208ENST00000487572 MFSD6Q6ZSS7 791 aa23.2■■□□□ 1.3
SEC22A-208ENST00000487572 FASTKD5Q7L8L6 764 aaKnown RBP23.2■■□□□ 1.3
SEC22A-208ENST00000487572 LSG1Q9H089 658 aaKnown RBP23.2■■□□□ 1.3
SEC22A-208ENST00000487572 ALDH1A1P00352 501 aa23.19■■□□□ 1.3
SEC22A-208ENST00000487572 TFAP4Q01664 338 aa23.19■■□□□ 1.3
SEC22A-208ENST00000487572 STAG1Q8WVM7 1258 aa23.19■■□□□ 1.3
SEC22A-208ENST00000487572 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.19■■□□□ 1.3
SEC22A-208ENST00000487572 KANSL2Q9H9L4 492 aa23.19■■□□□ 1.3
SEC22A-208ENST00000487572 TMOD4Q9NZQ9 345 aa23.19■■□□□ 1.3
SEC22A-208ENST00000487572 RBM8AQ9Y5S9 174 aaKnown RBP23.19■■□□□ 1.3
SEC22A-208ENST00000487572 LAMA4Q16363 1823 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 TSPY2A6NKD2 308 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 CA12O43570 354 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 ORC4O43929 436 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 TBC1D8O95759 1140 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 GPAT2Q6NUI2 795 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 ANKRD23Q86SG2 305 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 MAP4K1Q92918 833 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 RNF41Q9H4P4 317 aaPredicted RBP23.18■■□□□ 1.3
SEC22A-208ENST00000487572 ARHGEF10LQ9HCE6 1279 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 SAGE1Q9NXZ1 904 aa23.18■■□□□ 1.3
SEC22A-208ENST00000487572 NEDD4P46934 1319 aa23.17■■□□□ 1.3
SEC22A-208ENST00000487572 A0A1W2PRG0 241 aa23.17■■□□□ 1.3
SEC22A-208ENST00000487572 C19orf81C9J6K1 198 aa23.17■■□□□ 1.3
SEC22A-208ENST00000487572 PDHXO00330 501 aa23.17■■□□□ 1.3
SEC22A-208ENST00000487572 FGRP09769 529 aa23.17■■□□□ 1.3
SEC22A-208ENST00000487572 EEF2P13639 858 aaKnown RBP23.17■■□□□ 1.3
SEC22A-208ENST00000487572 SH3D19Q5HYK7 790 aa23.17■■□□□ 1.3
SEC22A-208ENST00000487572 TREML2Q5T2D2 321 aa23.17■■□□□ 1.3
SEC22A-208ENST00000487572 USP17L2Q6R6M4 530 aa23.17■■□□□ 1.3
SEC22A-208ENST00000487572 PTPRFP10586 1907 aa23.16■■□□□ 1.3
SEC22A-208ENST00000487572 PCNTO95613 3336 aa23.16■■□□□ 1.3
SEC22A-208ENST00000487572 TAF1CQ15572 869 aaPredicted RBP23.16■■□□□ 1.3
SEC22A-208ENST00000487572 SIAH1Q8IUQ4 282 aa23.16■■□□□ 1.3
SEC22A-208ENST00000487572 PROCA1Q8NCQ7 364 aaPredicted RBP23.16■■□□□ 1.3
SEC22A-208ENST00000487572 NEDD1Q8NHV4 660 aa23.16■■□□□ 1.3
SEC22A-208ENST00000487572 KIAA1683Q9H0B3 1180 aa23.16■■□□□ 1.3
SEC22A-208ENST00000487572 EMILIN3Q9NT22 766 aa23.16■■□□□ 1.3
SEC22A-208ENST00000487572 CYP21A2P08686 494 aa23.15■■□□□ 1.3
SEC22A-208ENST00000487572 PCP11498 1178 aaKnown RBP23.15■■□□□ 1.3
SEC22A-208ENST00000487572 USP14P54578 494 aa23.15■■□□□ 1.3
SEC22A-208ENST00000487572 CRHR2Q13324 411 aa23.15■■□□□ 1.3
SEC22A-208ENST00000487572 CEP95Q96GE4 821 aa23.15■■□□□ 1.3
SEC22A-208ENST00000487572 R3HDMLQ9H3Y0 253 aa23.15■■□□□ 1.3
SEC22A-208ENST00000487572 SH2D4AQ9H788 454 aa23.15■■□□□ 1.3
SEC22A-208ENST00000487572 AGTPBP1Q9UPW5 1226 aa23.15■■□□□ 1.3
SEC22A-208ENST00000487572 PLIN4Q96Q06 1357 aa23.14■■□□□ 1.3
SEC22A-208ENST00000487572 GREB1LQ9C091 1923 aaPredicted RBP23.14■■□□□ 1.3
SEC22A-208ENST00000487572 IGKV6D-41A0A0C4DH26 115 aa23.14■■□□□ 1.29
SEC22A-208ENST00000487572 NMT2O60551 498 aa23.14■■□□□ 1.29
SEC22A-208ENST00000487572 HSPA8P11142 646 aaKnown RBP23.14■■□□□ 1.29
SEC22A-208ENST00000487572 CTCFP49711 727 aaPredicted RBP23.14■■□□□ 1.29
SEC22A-208ENST00000487572 LOC285556D6RIA3 1793 aa23.14■■□□□ 1.29
SEC22A-208ENST00000487572 RAD21O60216 631 aa23.13■■□□□ 1.29
SEC22A-208ENST00000487572 NKX2-3Q8TAU0 364 aa23.13■■□□□ 1.29
SEC22A-208ENST00000487572 ESR2Q92731 530 aa23.13■■□□□ 1.29
SEC22A-208ENST00000487572 ZFYVE28Q9HCC9 887 aa23.13■■□□□ 1.29
SEC22A-208ENST00000487572 ZCCHC17Q9NP64 241 aaKnown RBP23.13■■□□□ 1.29
SEC22A-208ENST00000487572 MTMR4Q9NYA4 1195 aa23.13■■□□□ 1.29
SEC22A-208ENST00000487572 CLIP2Q9UDT6 1046 aa23.13■■□□□ 1.29
SEC22A-208ENST00000487572 TMX2Q9Y320 296 aa23.13■■□□□ 1.29
SEC22A-208ENST00000487572 TAF6LQ9Y6J9 622 aa23.13■■□□□ 1.29
SEC22A-208ENST00000487572 B4E1Z4 1266 aa23.12■■□□□ 1.29
SEC22A-208ENST00000487572 KDM4AO75164 1064 aa23.12■■□□□ 1.29
SEC22A-208ENST00000487572 CYP2C8P10632 490 aa23.12■■□□□ 1.29
SEC22A-208ENST00000487572 LBX1P52954 281 aa23.12■■□□□ 1.29
SEC22A-208ENST00000487572 NYAP2Q9P242 653 aa23.12■■□□□ 1.29
SEC22A-208ENST00000487572 TTLL1O95922 423 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 VCAM1P19320 739 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 PABPC4Q13310 644 aaKnown RBP eCLIP23.11■■□□□ 1.29
SEC22A-208ENST00000487572 SPICE1Q8N0Z3 855 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 LRRC47Q8N1G4 583 aaKnown RBP23.11■■□□□ 1.29
SEC22A-208ENST00000487572 C12orf42Q96LP6 360 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 PARK7Q99497 189 aaKnown RBP23.11■■□□□ 1.29
SEC22A-208ENST00000487572 KRT23Q9C075 422 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 CNNM2Q9H8M5 875 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 IL17RBQ9NRM6 502 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 STX8Q9UNK0 236 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 SLC45A1Q9Y2W3 748 aa23.11■■□□□ 1.29
SEC22A-208ENST00000487572 SLC27A2O14975 620 aa23.1■■□□□ 1.29
SEC22A-208ENST00000487572 KIAA1755Q5JYT7 1200 aa23.1■■□□□ 1.29
SEC22A-208ENST00000487572 CREB3L3Q68CJ9 461 aa23.1■■□□□ 1.29
SEC22A-208ENST00000487572 ZKSCAN3Q9BRR0 538 aa23.1■■□□□ 1.29
SEC22A-208ENST00000487572 CFHR5Q9BXR6 569 aa23.1■■□□□ 1.29
SEC22A-208ENST00000487572 VCPKMTQ9H867 229 aa23.1■■□□□ 1.29
SEC22A-208ENST00000487572 GOPCQ9HD26 462 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms