RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.04
ATPAF1-205ENST00000487193 FAM47AQ5JRC9 791 aa15.33■□□□□ 0.04
ATPAF1-205ENST00000487193 KRT40Q6A162 431 aa15.33■□□□□ 0.04
ATPAF1-205ENST00000487193 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
ATPAF1-205ENST00000487193 CNMDO75829 334 aa15.32■□□□□ 0.04
ATPAF1-205ENST00000487193 HOXC6P09630 235 aa15.32■□□□□ 0.04
ATPAF1-205ENST00000487193 CCNA1P78396 465 aa15.32■□□□□ 0.04
ATPAF1-205ENST00000487193 DPP9Q86TI2 863 aa15.32■□□□□ 0.04
ATPAF1-205ENST00000487193 MYH2Q9UKX2 1941 aa15.32■□□□□ 0.04
ATPAF1-205ENST00000487193 A0A1W2PQ45 241 aaPredicted RBP15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 A0A1W2PQY0 241 aa15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 PDE8BO95263 885 aa15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 FLIIQ13045 1269 aa15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 GRB14Q14449 540 aa15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 GJD3Q8N144 294 aa15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 GTF3C2Q8WUA4 911 aaPredicted RBP15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 CERS4Q9HA82 394 aa15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 USP34Q70CQ2 3546 aa15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 PRRC2BQ5JSZ5 2229 aaKnown RBP15.31■□□□□ 0.04
ATPAF1-205ENST00000487193 IFIT1P09914 478 aaKnown RBP15.3■□□□□ 0.04
ATPAF1-205ENST00000487193 ALADP13716 330 aa15.3■□□□□ 0.04
ATPAF1-205ENST00000487193 SSTR3P32745 418 aaPredicted RBP15.3■□□□□ 0.04
ATPAF1-205ENST00000487193 PSRC1Q6PGN9 363 aaPredicted RBP15.3■□□□□ 0.04
ATPAF1-205ENST00000487193 TMEM199Q8N511 208 aa15.3■□□□□ 0.04
ATPAF1-205ENST00000487193 WDR18Q9BV38 432 aa15.3■□□□□ 0.04
ATPAF1-205ENST00000487193 XPNPEP3Q9NQH7 507 aa15.3■□□□□ 0.04
ATPAF1-205ENST00000487193 RABGAP1Q9Y3P9 1069 aa15.3■□□□□ 0.04
ATPAF1-205ENST00000487193 C19orf81C9J6K1 198 aa15.29■□□□□ 0.04
ATPAF1-205ENST00000487193 PGK1P00558 417 aa15.29■□□□□ 0.04
ATPAF1-205ENST00000487193 IGHA2P01877 340 aa15.29■□□□□ 0.04
ATPAF1-205ENST00000487193 ANKRD33Q7Z3H0 272 aa15.29■□□□□ 0.04
ATPAF1-205ENST00000487193 TOX2Q96NM4 488 aa15.29■□□□□ 0.04
ATPAF1-205ENST00000487193 SMCHD1A6NHR9 2005 aa15.29■□□□□ 0.04
ATPAF1-205ENST00000487193 RFX7Q2KHR2 1363 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 ZNF521Q96K83 1311 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 USP17L10C9JJH3 530 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 FGBP02675 491 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 SLC5A1P13866 664 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 OLFML2BQ68BL8 750 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 RNF180Q86T96 592 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 VGLL2Q8N8G2 317 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 PPP1R12CQ9BZL4 782 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 TBX21Q9UL17 535 aa15.28■□□□□ 0.04
ATPAF1-205ENST00000487193 F6X3S4 739 aa15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 GRM8O00222 908 aa15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 POU3F3P20264 500 aaPredicted RBP15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 BTDP43251 543 aa15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 JAG1P78504 1218 aa15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 OTOP2Q7RTS6 562 aa15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 MTIF3Q9H2K0 278 aaKnown RBP15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 STARD7Q9NQZ5 370 aa15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 C9orf78Q9NZ63 289 aaPredicted RBP15.27■□□□□ 0.04
ATPAF1-205ENST00000487193 CFAP54Q96N23 3096 aa15.27■□□□□ 0.03
ATPAF1-205ENST00000487193 A0A0G2JMZ2 1700 aa15.26■□□□□ 0.03
ATPAF1-205ENST00000487193 RARBP10826 455 aa15.26■□□□□ 0.03
ATPAF1-205ENST00000487193 ADORA2AP29274 412 aa15.26■□□□□ 0.03
ATPAF1-205ENST00000487193 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
ATPAF1-205ENST00000487193 FAM178BQ8IXR5 827 aa15.26■□□□□ 0.03
ATPAF1-205ENST00000487193 IL23AQ9NPF7 189 aa15.26■□□□□ 0.03
ATPAF1-205ENST00000487193 EMILIN3Q9NT22 766 aa15.26■□□□□ 0.03
ATPAF1-205ENST00000487193 BTBD7Q9P203 1132 aa15.26■□□□□ 0.03
ATPAF1-205ENST00000487193 EPOPA6NHQ4 379 aa15.25■□□□□ 0.03
ATPAF1-205ENST00000487193 FGFR2P21802 821 aa15.25■□□□□ 0.03
ATPAF1-205ENST00000487193 CALD1Q05682 793 aaKnown RBP15.25■□□□□ 0.03
ATPAF1-205ENST00000487193 PUM3Q15397 648 aaKnown RBP15.25■□□□□ 0.03
ATPAF1-205ENST00000487193 SHROOM1Q2M3G4 852 aaPredicted RBP15.25■□□□□ 0.03
ATPAF1-205ENST00000487193 KLHDC4Q8TBB5 520 aa15.25■□□□□ 0.03
ATPAF1-205ENST00000487193 PCDHA11Q9Y5I1 949 aa15.25■□□□□ 0.03
ATPAF1-205ENST00000487193 GAKO14976 1311 aa15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 COBLO75128 1261 aa15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 CYP2C18P33260 490 aa15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 ZYXQ15942 572 aaKnown RBP15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 HFE2Q6ZVN8 426 aa15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 DZIP1Q86YF9 867 aaKnown RBP15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 TSR2Q969E8 191 aaKnown RBP15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 SUCLG2Q96I99 432 aa15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 TRANK1O15050 2925 aa15.24■□□□□ 0.03
ATPAF1-205ENST00000487193 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L15C9J2P7 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L13C9JLJ4 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L11C9JVI0 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L18D6R9N7 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L22D6RA61 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L17D6RBQ6 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L19D6RCP7 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L20D6RJB6 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 GFRA3O60609 400 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 ASNSP08243 561 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 ACLYP53396 1101 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L24Q0WX57 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 TWISTNBQ3B726 338 aaPredicted RBP15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 NUP133Q8WUM0 1156 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
ATPAF1-205ENST00000487193 DCXO43602 365 aa15.22■□□□□ 0.03
ATPAF1-205ENST00000487193 GDF11O95390 407 aa15.22■□□□□ 0.03
ATPAF1-205ENST00000487193 WDR43Q15061 677 aaKnown RBP eCLIP15.22■□□□□ 0.03
ATPAF1-205ENST00000487193 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
ATPAF1-205ENST00000487193 PRSS33Q8NF86 280 aa15.22■□□□□ 0.03
ATPAF1-205ENST00000487193 ARNTL2Q8WYA1 636 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms