RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	GABPA	Q06546	454 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	MOGS	Q13724	837 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	TAF1C	Q15572	869 aa	Predicted RBP	11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	SH3D19	Q5HYK7	790 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	AMOTL1	Q8IY63	956 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	MIGA1	Q8NAN2	632 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	PI4K2B	Q8TCG2	481 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	APPBP2	Q92624	585 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	TSKS	Q9UJT2	592 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	PNMA3	Q9UL41	463 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	NDUFB9	Q9Y6M9	179 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	ATAD5	Q96QE3	1844 aa		11.93	□□□□□ -0.5
KRIT1-223	ENST00000487168	ADGRA2	Q96PE1	1338 aa		11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	C19orf81	C9J6K1	198 aa		11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	SMARCA5	O60264	1052 aa	Predicted RBP	11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	DYNLL1	P63167	89 aa	Known RBP	11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	SP3	Q02447	781 aa		11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	FAM43A	Q8N2R8	423 aa		11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	OSBPL3	Q9H4L5	887 aa		11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	DNAJC18	Q9H819	358 aa		11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	PALD1	Q9ULE6	856 aa		11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	AGTPBP1	Q9UPW5	1226 aa		11.92	□□□□□ -0.5
KRIT1-223	ENST00000487168	RNF113A	O15541	343 aa	Known RBP	11.91	□□□□□ -0.5
KRIT1-223	ENST00000487168	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.91	□□□□□ -0.5
KRIT1-223	ENST00000487168	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.91	□□□□□ -0.5
KRIT1-223	ENST00000487168	ABHD8	Q96I13	439 aa		11.91	□□□□□ -0.5
KRIT1-223	ENST00000487168	MCOLN1	Q9GZU1	580 aa		11.91	□□□□□ -0.5
KRIT1-223	ENST00000487168	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.91	□□□□□ -0.5
KRIT1-223	ENST00000487168	ZBTB21	Q9ULJ3	1066 aa		11.91	□□□□□ -0.5
KRIT1-223	ENST00000487168	PDHX	O00330	501 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	MBD4	O95243	580 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	BACE1	P56817	501 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	NUCB1	Q02818	461 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	DGKZ	Q13574	1117 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	SBK1	Q52WX2	424 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	ANKRD45	Q5TZF3	282 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	C17orf99	Q6UX52	265 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	LCORL	Q8N3X6	602 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	EVI5L	Q96CN4	794 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	C12orf42	Q96LP6	360 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	CCDC17	Q96LX7	622 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	ZNF287	Q9HBT7	754 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	MCM9	Q9NXL9	1143 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	ROBO3	Q96MS0	1386 aa		11.9	□□□□□ -0.5
KRIT1-223	ENST00000487168	POLR3D	P05423	398 aa	Predicted RBP	11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	HOXA7	P31268	230 aa	Predicted RBP	11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	GCLC	P48506	637 aa	Predicted RBP	11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	NT5C2	P49902	561 aa		11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	USP14	P54578	494 aa		11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	PDE1A	P54750	535 aa		11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	KIF22	Q14807	665 aa		11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	CERKL	Q49MI3	558 aa	Predicted RBP	11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	GPAT2	Q6NUI2	795 aa		11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	EDC3	Q96F86	508 aa	Known RBP	11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	STRBP	Q96SI9	672 aa	Known RBP	11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.89	□□□□□ -0.51
KRIT1-223	ENST00000487168	USP17L10	C9JJH3	530 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	DPYSL4	O14531	572 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	SHMT1	P34896	483 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	LACTB	P83111	547 aa	Predicted RBP	11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	SPP2	Q13103	211 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	C12orf60	Q5U649	245 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	TMEM179	Q6ZVK1	233 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	CHD1L	Q86WJ1	897 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	NACAP1	Q9BZK3	213 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	KIAA1683	Q9H0B3	1180 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	R3HDML	Q9H3Y0	253 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	ARMT1	Q9H993	441 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	CABP5	Q9NP86	173 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	SAP30BP	Q9UHR5	308 aa	Known RBP	11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	SYNPO2	Q9UMS6	1093 aa		11.88	□□□□□ -0.51
KRIT1-223	ENST00000487168	ZMYM6	O95789	1325 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	TRIM75P	A6NK02	468 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	BCR	P11274	1271 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	CAPN2	P17655	700 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	PLCD1	P51178	756 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	FAM110C	Q1W6H9	321 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	ABCB5	Q2M3G0	1257 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	ZMYM1	Q5SVZ6	1142 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	C16orf86	Q6ZW13	317 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	OTOP1	Q7RTM1	612 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	EXOC6	Q8TAG9	804 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	SDR42E1	Q8WUS8	393 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	PUS7L	Q9H0K6	701 aa	Known RBP	11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	SH2D4A	Q9H788	454 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	EFCC1	Q9HA90	598 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	EMILIN3	Q9NT22	766 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	TMOD4	Q9NZQ9	345 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	SLC4A4	Q9Y6R1	1079 aa		11.87	□□□□□ -0.51
KRIT1-223	ENST00000487168	BRCA2	P51587	3418 aa		11.86	□□□□□ -0.51
KRIT1-223	ENST00000487168	FAM196B	A6NMK8	535 aa		11.86	□□□□□ -0.51
KRIT1-223	ENST00000487168	TRIM66	O15016	1216 aa		11.86	□□□□□ -0.51
KRIT1-223	ENST00000487168	GPAA1	O43292	621 aa		11.86	□□□□□ -0.51
KRIT1-223	ENST00000487168	GH2	P01242	217 aa		11.86	□□□□□ -0.51
KRIT1-223	ENST00000487168	HOXD10	P28358	340 aa		11.86	□□□□□ -0.51
KRIT1-223	ENST00000487168	RGS19	P49795	217 aa		11.86	□□□□□ -0.51
KRIT1-223	ENST00000487168	RRP1B	Q14684	758 aa	Known RBP	11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms