RNA–Protein interactions for RNA: ENST00000487163.5

USP21-208, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 1 (best)

Gene USP21, Length 2,514 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-208ENST00000487163 SFPQP23246 707 aaKnown RBP eCLIP19.26■□□□□ 0.67
USP21-208ENST00000487163 PTPN14Q15678 1187 aa19.26■□□□□ 0.67
USP21-208ENST00000487163 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
USP21-208ENST00000487163 NYAP1Q6ZVC0 841 aa19.26■□□□□ 0.67
USP21-208ENST00000487163 SRBD1Q8N5C6 995 aaKnown RBP19.26■□□□□ 0.67
USP21-208ENST00000487163 CEP131Q9UPN4 1083 aa19.26■□□□□ 0.67
USP21-208ENST00000487163 TRIM75PA6NK02 468 aa19.26■□□□□ 0.67
USP21-208ENST00000487163 USP17L8P0C7I0 530 aa19.26■□□□□ 0.67
USP21-208ENST00000487163 TMTC3Q6ZXV5 915 aa19.26■□□□□ 0.67
USP21-208ENST00000487163 EPSTI1Q96J88 318 aa19.26■□□□□ 0.67
USP21-208ENST00000487163 RBM28Q9NW13 759 aaKnown RBP19.26■□□□□ 0.67
USP21-208ENST00000487163 COL24A1Q17RW2 1714 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 CTIFO43310 598 aaKnown RBP19.25■□□□□ 0.67
USP21-208ENST00000487163 NPY5RQ15761 445 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 DZIP1Q86YF9 867 aaKnown RBP19.25■□□□□ 0.67
USP21-208ENST00000487163 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
USP21-208ENST00000487163 MCM9Q9NXL9 1143 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 CNTNAP5Q8WYK1 1306 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 CCDC88AQ3V6T2 1871 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 DLEC1Q9Y238 1755 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 A0A087X0B3 334 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 TMEM232C9JQI7 657 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 ACTN4O43707 911 aaKnown RBP19.25■□□□□ 0.67
USP21-208ENST00000487163 PCP11498 1178 aaKnown RBP19.25■□□□□ 0.67
USP21-208ENST00000487163 E4F1Q66K89 784 aaPredicted RBP19.25■□□□□ 0.67
USP21-208ENST00000487163 ATP8A2Q9NTI2 1148 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 ANKIB1Q9P2G1 1089 aa19.25■□□□□ 0.67
USP21-208ENST00000487163 HOOK1Q9UJC3 728 aaKnown RBP19.25■□□□□ 0.67
USP21-208ENST00000487163 TSPY2A6NKD2 308 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 ORC4O43929 436 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 CALM1P0DP23 149 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 CALM2P0DP24 149 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 CALM3P0DP25 149 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 FMR1Q06787 632 aaKnown RBP eCLIP19.24■□□□□ 0.67
USP21-208ENST00000487163 ZNF174Q15697 407 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 MTERF4Q7Z6M4 381 aaKnown RBP19.24■□□□□ 0.67
USP21-208ENST00000487163 TRMT44Q8IYL2 757 aaKnown RBP19.24■□□□□ 0.67
USP21-208ENST00000487163 CCDC150Q8NCX0 1101 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
USP21-208ENST00000487163 DHX58Q96C10 678 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 GPR101Q96P66 508 aaPredicted RBP19.24■□□□□ 0.67
USP21-208ENST00000487163 PAXBP1Q9Y5B6 917 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 DDAH1O94760 285 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 GOLGA8FQ08AF8 430 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 GOLGA8DPQ0D2H9 430 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 NAA30Q147X3 362 aaPredicted RBP19.24■□□□□ 0.67
USP21-208ENST00000487163 NFIXQ14938 502 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 CCDC112Q8NEF3 446 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 SMARCE1Q969G3 411 aa19.24■□□□□ 0.67
USP21-208ENST00000487163 TNRC6CQ9HCJ0 1690 aaKnown RBP19.24■□□□□ 0.67
USP21-208ENST00000487163 ADAMTS3O15072 1205 aa19.23■□□□□ 0.67
USP21-208ENST00000487163 RGL2O15211 777 aa19.23■□□□□ 0.67
USP21-208ENST00000487163 CASP1P29466 404 aa19.23■□□□□ 0.67
USP21-208ENST00000487163 PDS5AQ29RF7 1337 aaKnown RBP19.23■□□□□ 0.67
USP21-208ENST00000487163 SARSP49591 514 aaKnown RBP19.23■□□□□ 0.67
USP21-208ENST00000487163 GRIK5Q16478 980 aa19.23■□□□□ 0.67
USP21-208ENST00000487163 ELOA2Q8IYF1 753 aaPredicted RBP19.23■□□□□ 0.67
USP21-208ENST00000487163 ARPP21Q9UBL0 812 aaPredicted RBP19.23■□□□□ 0.67
USP21-208ENST00000487163 LAMB1P07942 1786 aa19.23■□□□□ 0.67
USP21-208ENST00000487163 IRS2Q9Y4H2 1338 aa19.23■□□□□ 0.67
USP21-208ENST00000487163 AFMP43652 599 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 NT5DC1Q5TFE4 455 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 RCSD1Q6JBY9 416 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 KIAA1551Q9HCM1 1747 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 RFC4P35249 363 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 DIXDC1Q155Q3 683 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 SYMPKQ92797 1274 aaKnown RBP19.22■□□□□ 0.67
USP21-208ENST00000487163 TNFRSF25Q93038 417 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 DYNLL2Q96FJ2 89 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 INTS13Q9NVM9 706 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 USP21Q9UK80 565 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 NFE2L3Q9Y4A8 694 aa19.22■□□□□ 0.67
USP21-208ENST00000487163 MORC3Q14149 939 aa19.21■□□□□ 0.67
USP21-208ENST00000487163 MED15Q96RN5 788 aa19.21■□□□□ 0.67
USP21-208ENST00000487163 BRMS1Q9HCU9 246 aa19.21■□□□□ 0.67
USP21-208ENST00000487163 SBK1Q52WX2 424 aa19.21■□□□□ 0.67
USP21-208ENST00000487163 CBFA2T2O43439 604 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 TFAP4Q01664 338 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 NCBP1Q09161 790 aaKnown RBP19.2■□□□□ 0.66
USP21-208ENST00000487163 PPP1R13BQ96KQ4 1090 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 VWA3AA6NCI4 1184 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 SCG2P13521 617 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 USP5P45974 858 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 NLRP5P59047 1200 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 PTGDRQ13258 359 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 TTC38Q5R3I4 469 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 PIK3AP1Q6ZUJ8 805 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 VSTM4Q8IW00 320 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 MLKLQ8NB16 471 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 SH3RF3Q8TEJ3 882 aaPredicted RBP19.2■□□□□ 0.66
USP21-208ENST00000487163 IL17RBQ9NRM6 502 aa19.2■□□□□ 0.66
USP21-208ENST00000487163 LDHBP07195 334 aaKnown RBP19.19■□□□□ 0.66
USP21-208ENST00000487163 ANKRD7Q92527 254 aa19.19■□□□□ 0.66
USP21-208ENST00000487163 STAMQ92783 540 aa19.19■□□□□ 0.66
USP21-208ENST00000487163 MTMR7Q9Y216 660 aa19.19■□□□□ 0.66
USP21-208ENST00000487163 TOP1P11387 765 aaKnown RBP19.19■□□□□ 0.66
USP21-208ENST00000487163 CDK11BP21127 795 aaKnown RBP19.19■□□□□ 0.66
USP21-208ENST00000487163 TRAPPC3LQ5T215 181 aa19.19■□□□□ 0.66
USP21-208ENST00000487163 FAM196AQ6ZSG2 479 aa19.19■□□□□ 0.66
USP21-208ENST00000487163 FNBP4Q8N3X1 1017 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms