RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SGO2Q562F6 1265 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 MRM1Q6IN84 353 aaKnown RBP7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 SDE2Q6IQ49 451 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 KIAA1211LQ6NV74 962 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 ARMCX6Q7L4S7 300 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 TMEM192Q8IY95 271 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 NLGN1Q8N2Q7 840 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 ZNF214Q9UL59 606 aaPredicted RBP7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 NCAPHQ15003 741 aa7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 GNPTABQ3T906 1256 aa7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 LILRB2Q8N423 598 aa7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 CYB5D2Q8WUJ1 264 aa7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 KLHL6Q8WZ60 621 aa7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 MEGF10Q96KG7 1140 aa7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 RNPC3Q96LT9 517 aaKnown RBP7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 SLC6A18Q96N87 628 aa7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 SEMA6CQ9H3T2 930 aa7.36□□□□□ -1.23
PRPF38A-203ENST00000487160 DYNC1LI2O43237 492 aaPredicted RBP7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 BMP3P12645 472 aa7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 RXRBP28702 533 aa7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 SLC7A5Q01650 507 aa7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 DZIP1LQ8IYY4 767 aaKnown RBP7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 ARMC10Q8N2F6 343 aa7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 MFSD2AQ8NA29 543 aa7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 PPP1R13LQ8WUF5 828 aa7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 EZH1Q92800 747 aaPredicted RBP7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 DHRS1Q96LJ7 313 aa7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 YIPF2Q9BWQ6 316 aa7.35□□□□□ -1.23
PRPF38A-203ENST00000487160 TP53P04637 393 aaPredicted RBP7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 MAP4P27816 1152 aaKnown RBP7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 CANXP27824 592 aaKnown RBP7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 PMS1P54277 932 aaKnown RBP7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 MTERF2Q49AM1 385 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 TDRD10Q5VZ19 366 aaKnown RBP7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 TXNRD3Q86VQ6 643 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 PPFIBP1Q86W92 1011 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 RIN3Q8TB24 985 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 UTP4Q969X6 686 aaKnown RBP7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 MYRFLQ96LU7 910 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 MIPEPQ99797 713 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 KANSL2Q9H9L4 492 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 FAM86C1Q9NVL1 165 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 SUCOQ9UBS9 1254 aaKnown RBP7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 CEP131Q9UPN4 1083 aa7.34□□□□□ -1.23
PRPF38A-203ENST00000487160 C9IYK1 514 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 CLEC3AO75596 197 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 MAP7Q14244 749 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 UVSSAQ2YD98 709 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 BBS9Q3SYG4 887 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 SPATC1Q76KD6 591 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 CDH24Q86UP0 819 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 PSMG3-AS1Q96PY0 264 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 PFDN2Q9UHV9 154 aa7.33□□□□□ -1.24
PRPF38A-203ENST00000487160 KRBA1A5PL33 1030 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 SUSD5O60279 629 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 SLITRK5O94991 958 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 CHMP4BP1P59074 171 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 TCEAL1Q15170 157 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 LETMD1Q6P1Q0 360 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 SEZ6L2Q6UXD5 910 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 EEPD1Q7L9B9 569 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 ALYREFQ86V81 257 aaKnown RBP7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 FAM20CQ8IXL6 584 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 ST13P5Q8NFI4 369 aaPredicted RBP7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 DNAJB8Q8NHS0 232 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 SH3TC2Q8TF17 1288 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 ZNF512BQ96KM6 892 aaPredicted RBP7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 KCNF1Q9H3M0 494 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 ZMYM5Q9UJ78 669 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 ABCC9O60706 1549 aa7.32□□□□□ -1.24
PRPF38A-203ENST00000487160 FAM95CA0A1B0GW59 222 aa7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 CHRNA4P43681 627 aa7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 CDK5R2Q13319 367 aa7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 NFKBIBQ15653 356 aa7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 AXDND1Q5T1B0 1012 aaPredicted RBP7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 EGFLAMQ63HQ2 1017 aa7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 ZNF662Q6ZS27 426 aa7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 PRDM10Q9NQV6 1147 aa7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 C1GALT1Q9NS00 363 aa7.31□□□□□ -1.24
PRPF38A-203ENST00000487160 KDM2BQ8NHM5 1336 aa7.3□□□□□ -1.24
PRPF38A-203ENST00000487160 RBAK-RBAKDNI3L0D1 243 aa7.3□□□□□ -1.24
PRPF38A-203ENST00000487160 SLC10A6Q3KNW5 377 aa7.3□□□□□ -1.24
PRPF38A-203ENST00000487160 NBPF12Q5TAG4 269 aaPredicted RBP7.3□□□□□ -1.24
PRPF38A-203ENST00000487160 DCAF15Q66K64 600 aa7.3□□□□□ -1.24
PRPF38A-203ENST00000487160 CCDC144CPQ8IYA2 1237 aa7.3□□□□□ -1.24
PRPF38A-203ENST00000487160 KREMEN1Q96MU8 473 aa7.3□□□□□ -1.24
PRPF38A-203ENST00000487160 COL17A1Q9UMD9 1497 aaPredicted RBP7.3□□□□□ -1.24
PRPF38A-203ENST00000487160 C1QTNF9BB2RNN3 333 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 HSD3B2P26439 372 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 SSRP1Q08945 709 aaKnown RBP7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 HEATR6Q6AI08 1181 aaKnown RBP7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 BEND4Q6ZU67 534 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 CD163Q86VB7 1156 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 ZNF669Q96BR6 464 aaPredicted RBP7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 VWCEQ96DN2 955 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 SSBP4Q9BWG4 385 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms