RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 CPA4Q9UI42 421 aa25.66■■□□□ 1.7
BUD23-217ENST00000487006 PRDM1O75626 825 aa25.65■■□□□ 1.7
BUD23-217ENST00000487006 PPARAQ07869 468 aa25.65■■□□□ 1.7
BUD23-217ENST00000487006 EMILIN3Q9NT22 766 aa25.65■■□□□ 1.7
BUD23-217ENST00000487006 TMOD4Q9NZQ9 345 aa25.65■■□□□ 1.7
BUD23-217ENST00000487006 C19orf81C9J6K1 198 aa25.64■■□□□ 1.7
BUD23-217ENST00000487006 HIP1O00291 1037 aa25.64■■□□□ 1.7
BUD23-217ENST00000487006 HSPD1P10809 573 aaKnown RBP25.64■■□□□ 1.7
BUD23-217ENST00000487006 RASA1P20936 1047 aa25.64■■□□□ 1.7
BUD23-217ENST00000487006 CAP1Q01518 475 aa25.64■■□□□ 1.7
BUD23-217ENST00000487006 CD99L2Q8TCZ2 262 aa25.64■■□□□ 1.7
BUD23-217ENST00000487006 CCDC17Q96LX7 622 aa25.64■■□□□ 1.7
BUD23-217ENST00000487006 IL25Q9H293 177 aa25.64■■□□□ 1.7
BUD23-217ENST00000487006 SLC45A1Q9Y2W3 748 aa25.64■■□□□ 1.7
BUD23-217ENST00000487006 A0A1W2PRG0 241 aa25.63■■□□□ 1.69
BUD23-217ENST00000487006 SP3Q02447 781 aa25.63■■□□□ 1.69
BUD23-217ENST00000487006 MKNK2Q9HBH9 465 aa25.63■■□□□ 1.69
BUD23-217ENST00000487006 CTDSPL2Q05D32 466 aa25.62■■□□□ 1.69
BUD23-217ENST00000487006 ALX1Q15699 326 aa25.62■■□□□ 1.69
BUD23-217ENST00000487006 USP17L2Q6R6M4 530 aa25.62■■□□□ 1.69
BUD23-217ENST00000487006 C17orf99Q6UX52 265 aa25.62■■□□□ 1.69
BUD23-217ENST00000487006 CTU1Q7Z7A3 348 aaKnown RBP25.62■■□□□ 1.69
BUD23-217ENST00000487006 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.62■■□□□ 1.69
BUD23-217ENST00000487006 MCOLN1Q9GZU1 580 aa25.62■■□□□ 1.69
BUD23-217ENST00000487006 FGAP02671 866 aa25.61■■□□□ 1.69
BUD23-217ENST00000487006 ICA1Q05084 483 aa25.61■■□□□ 1.69
BUD23-217ENST00000487006 SIAH1Q8IUQ4 282 aa25.61■■□□□ 1.69
BUD23-217ENST00000487006 KIAA1683Q9H0B3 1180 aa25.61■■□□□ 1.69
BUD23-217ENST00000487006 TACC3Q9Y6A5 838 aa25.61■■□□□ 1.69
BUD23-217ENST00000487006 ECM2O94769 699 aaPredicted RBP25.6■■□□□ 1.69
BUD23-217ENST00000487006 ERO1AQ96HE7 468 aa25.6■■□□□ 1.69
BUD23-217ENST00000487006 ASCC2Q9H1I8 757 aaPredicted RBP25.6■■□□□ 1.69
BUD23-217ENST00000487006 INCENPQ9NQS7 918 aa25.6■■□□□ 1.69
BUD23-217ENST00000487006 LAMA4Q16363 1823 aa25.59■■□□□ 1.69
BUD23-217ENST00000487006 CHMLP26374 656 aa25.59■■□□□ 1.69
BUD23-217ENST00000487006 MFAP1P55081 439 aaKnown RBP25.59■■□□□ 1.69
BUD23-217ENST00000487006 SMCR8Q8TEV9 937 aaPredicted RBP25.59■■□□□ 1.69
BUD23-217ENST00000487006 C12orf42Q96LP6 360 aa25.59■■□□□ 1.69
BUD23-217ENST00000487006 ARHGAP39Q9C0H5 1083 aa25.59■■□□□ 1.69
BUD23-217ENST00000487006 PNMA3Q9UL41 463 aa25.59■■□□□ 1.69
BUD23-217ENST00000487006 SLC3A2P08195 630 aaKnown RBP25.58■■□□□ 1.69
BUD23-217ENST00000487006 BCRP11274 1271 aa25.58■■□□□ 1.69
BUD23-217ENST00000487006 VCAM1P19320 739 aa25.58■■□□□ 1.69
BUD23-217ENST00000487006 USP14P54578 494 aa25.58■■□□□ 1.69
BUD23-217ENST00000487006 ATP2B2Q01814 1243 aa25.58■■□□□ 1.69
BUD23-217ENST00000487006 PDE4BQ07343 736 aa25.58■■□□□ 1.69
BUD23-217ENST00000487006 PABPC4Q13310 644 aaKnown RBP eCLIP25.58■■□□□ 1.69
BUD23-217ENST00000487006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.58■■□□□ 1.69
BUD23-217ENST00000487006 MYH4Q9Y623 1939 aa25.58■■□□□ 1.69
BUD23-217ENST00000487006 ZMYM6O95789 1325 aa25.58■■□□□ 1.69
BUD23-217ENST00000487006 EEF2P13639 858 aaKnown RBP25.57■■□□□ 1.68
BUD23-217ENST00000487006 OSBPP22059 807 aa25.57■■□□□ 1.68
BUD23-217ENST00000487006 HAND2P61296 217 aa25.57■■□□□ 1.68
BUD23-217ENST00000487006 KIAA1755Q5JYT7 1200 aa25.57■■□□□ 1.68
BUD23-217ENST00000487006 ZNF444Q8N0Y2 327 aaPredicted RBP25.57■■□□□ 1.68
BUD23-217ENST00000487006 ZNF287Q9HBT7 754 aa25.57■■□□□ 1.68
BUD23-217ENST00000487006 ARHGEF10LQ9HCE6 1279 aa25.57■■□□□ 1.68
BUD23-217ENST00000487006 ANAPC4Q9UJX5 808 aa25.57■■□□□ 1.68
BUD23-217ENST00000487006 TRIM17Q9Y577 477 aa25.57■■□□□ 1.68
BUD23-217ENST00000487006 MGAMO43451 1857 aa25.56■■□□□ 1.68
BUD23-217ENST00000487006 HOXA7P31268 230 aaPredicted RBP25.56■■□□□ 1.68
BUD23-217ENST00000487006 IRX3P78415 501 aaPredicted RBP25.56■■□□□ 1.68
BUD23-217ENST00000487006 LACTBP83111 547 aaPredicted RBP25.56■■□□□ 1.68
BUD23-217ENST00000487006 FAM47AQ5JRC9 791 aa25.56■■□□□ 1.68
BUD23-217ENST00000487006 OTOP1Q7RTM1 612 aa25.56■■□□□ 1.68
BUD23-217ENST00000487006 KANSL2Q9H9L4 492 aa25.56■■□□□ 1.68
BUD23-217ENST00000487006 CTGFP29279 349 aa25.55■■□□□ 1.68
BUD23-217ENST00000487006 P2RX7Q99572 595 aaKnown RBP25.55■■□□□ 1.68
BUD23-217ENST00000487006 NBPF3Q9H094 633 aa25.55■■□□□ 1.68
BUD23-217ENST00000487006 TMX2Q9Y320 296 aa25.55■■□□□ 1.68
BUD23-217ENST00000487006 IGKV6D-41A0A0C4DH26 115 aa25.54■■□□□ 1.68
BUD23-217ENST00000487006 ANKRD13CQ8N6S4 541 aa25.54■■□□□ 1.68
BUD23-217ENST00000487006 EFCC1Q9HA90 598 aa25.54■■□□□ 1.68
BUD23-217ENST00000487006 RAD50Q92878 1312 aa25.54■■□□□ 1.68
BUD23-217ENST00000487006 PLIN4Q96Q06 1357 aa25.54■■□□□ 1.68
BUD23-217ENST00000487006 DOCK3Q8IZD9 2030 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 PEX10O60683 326 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 TSPY3P0CV98 308 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 TSPY8P0CW00 308 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 TFAP4Q01664 338 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 TBC1D10CQ8IV04 446 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 SPICE1Q8N0Z3 855 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 CEP95Q96GE4 821 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 ABHD8Q96I13 439 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 DSCC1Q9BVC3 393 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 RPAP3Q9H6T3 665 aaPredicted RBP25.53■■□□□ 1.68
BUD23-217ENST00000487006 PPP4R2Q9NY27 417 aa25.53■■□□□ 1.68
BUD23-217ENST00000487006 USP17L15C9J2P7 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 USP17L13C9JLJ4 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 USP17L11C9JVI0 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 USP17L18D6R9N7 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 USP17L22D6RA61 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 USP17L17D6RBQ6 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 USP17L19D6RCP7 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 USP17L20D6RJB6 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 HERVK_113P62684 666 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 USP17L24Q0WX57 530 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 NEDD1Q8NHV4 660 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 SH2D4AQ9H788 454 aa25.52■■□□□ 1.68
BUD23-217ENST00000487006 VCPKMTQ9H867 229 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms