RNA–Protein interactions for RNA: ENST00000486750.1

SP140-211, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-211ENST00000486750 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
SP140-211ENST00000486750 PLEKHH3Q7Z736 793 aa16.09■□□□□ 0.17
SP140-211ENST00000486750 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
SP140-211ENST00000486750 CLEC10AQ8IUN9 316 aa16.09■□□□□ 0.17
SP140-211ENST00000486750 EDC3Q96F86 508 aaKnown RBP16.09■□□□□ 0.17
SP140-211ENST00000486750 LRRC26Q2I0M4 334 aa16.08■□□□□ 0.16
SP140-211ENST00000486750 MAP3K21Q5TCX8 1036 aa16.08■□□□□ 0.16
SP140-211ENST00000486750 GDF15Q99988 308 aa16.08■□□□□ 0.16
SP140-211ENST00000486750 BTBD7Q9P203 1132 aa16.08■□□□□ 0.16
SP140-211ENST00000486750 OGDHLQ9ULD0 1010 aa16.08■□□□□ 0.16
SP140-211ENST00000486750 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
SP140-211ENST00000486750 LAMA3Q16787 3333 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 SMIM22K7EJ46 135 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 MPHOSPH10O00566 681 aaKnown RBP16.07■□□□□ 0.16
SP140-211ENST00000486750 VCAM1P19320 739 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 MAPK4P31152 587 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 SHMT1P34896 483 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
SP140-211ENST00000486750 SEPT2Q15019 361 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 ABCB5Q2M3G0 1257 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
SP140-211ENST00000486750 MORN1Q5T089 497 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 SLC44A5Q8NCS7 719 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 SOCS4Q8WXH5 440 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 USP6NLQ92738 828 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 DNAJC2Q99543 621 aaKnown RBP16.07■□□□□ 0.16
SP140-211ENST00000486750 SERPINB13Q9UIV8 391 aa16.07■□□□□ 0.16
SP140-211ENST00000486750 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
SP140-211ENST00000486750 COL11A1P12107 1806 aaPredicted RBP16.07■□□□□ 0.16
SP140-211ENST00000486750 RLFQ13129 1914 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 CHGBP05060 677 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 POLR3DP05423 398 aaPredicted RBP16.06■□□□□ 0.16
SP140-211ENST00000486750 CNGA1P29973 690 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 GUCY1A2P33402 732 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 RGS2P41220 211 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 ANKLE1Q8NAG6 615 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 SLC17A8Q8NDX2 589 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 NPLOC4Q8TAT6 608 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 SDR42E1Q8WUS8 393 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
SP140-211ENST00000486750 APBA2Q99767 749 aa16.06■□□□□ 0.16
SP140-211ENST00000486750 RPAP3Q9H6T3 665 aaPredicted RBP16.06■□□□□ 0.16
SP140-211ENST00000486750 USP17L15C9J2P7 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 USP17L13C9JLJ4 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 USP17L11C9JVI0 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 USP17L18D6R9N7 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 USP17L22D6RA61 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 USP17L17D6RBQ6 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 USP17L19D6RCP7 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 USP17L20D6RJB6 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 ATN1P54259 1190 aaPredicted RBP16.05■□□□□ 0.16
SP140-211ENST00000486750 USP17L24Q0WX57 530 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 MAP2K5Q13163 448 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 KIAA1755Q5JYT7 1200 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 LHX8Q68G74 356 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 TATDN1Q6P1N9 297 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 MIER1Q8N108 512 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 DYNLL2Q96FJ2 89 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 UBE2OQ9C0C9 1292 aaKnown RBP16.05■□□□□ 0.16
SP140-211ENST00000486750 SMCHD1A6NHR9 2005 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 MYH7P12883 1935 aa16.05■□□□□ 0.16
SP140-211ENST00000486750 PARP14Q460N5 1801 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 MAGEB6P1A0A0J9YX57 407 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 SPDYE16A6NNV3 312 aaPredicted RBP16.04■□□□□ 0.16
SP140-211ENST00000486750 GOLIM4O00461 696 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
SP140-211ENST00000486750 PDE6AP16499 860 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 CYP2C19P33261 490 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 MAP3K12Q12852 859 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 CATSPERGQ6ZRH7 1159 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 LCORLQ8N3X6 602 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
SP140-211ENST00000486750 COL6A3P12111 3177 aa16.04■□□□□ 0.16
SP140-211ENST00000486750 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 CYP2D7A0A087X1C5 515 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 A0A1W2PRG0 241 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 XRCC5P13010 732 aaKnown RBP16.03■□□□□ 0.16
SP140-211ENST00000486750 DEFB123Q8N688 67 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 TRPV1Q8NER1 839 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 TANGO6Q9C0B7 1094 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
SP140-211ENST00000486750 ARMT1Q9H993 441 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 CABP5Q9NP86 173 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 MCM9Q9NXL9 1143 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 RABGAP1Q9Y3P9 1069 aa16.03■□□□□ 0.16
SP140-211ENST00000486750 PRKAB2O43741 272 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 PTPREP23469 700 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 SLC9C2Q5TAH2 1124 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 TTC6Q86TZ1 520 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 C12orf42Q96LP6 360 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 KIAA1683Q9H0B3 1180 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 GINM1Q9NU53 330 aa16.02■□□□□ 0.16
SP140-211ENST00000486750 A0A0G2JMZ2 1700 aa16.02■□□□□ 0.15
SP140-211ENST00000486750 A0A1W2PPC1 479 aa16.01■□□□□ 0.15
SP140-211ENST00000486750 COL6A1P12109 1028 aa16.01■□□□□ 0.15
SP140-211ENST00000486750 ATP2B2Q01814 1243 aa16.01■□□□□ 0.15
SP140-211ENST00000486750 PLS1Q14651 629 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms