RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 DCAF15Q66K64 600 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 CYB5R4Q7L1T6 521 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 IFNL1Q8IU54 200 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 MB21D2Q8IYB1 491 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-229ENST00000486665 ZNF444Q8N0Y2 327 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-229ENST00000486665 NCOA7Q8NI08 942 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 ZNF341Q9BYN7 854 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 ZSWIM5Q9P217 1185 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 ZNF112Q9UJU3 913 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 LAMA4Q16363 1823 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 KDM4AO75164 1064 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 GDF11O95390 407 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 TFAP4Q01664 338 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 TRDNQ13061 729 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 HOOK2Q96ED9 719 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 SLC10A4Q96EP9 437 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.09■□□□□ 0.01
HDAC6-229ENST00000486665 TM6SF1Q9BZW5 370 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 KRT23Q9C075 422 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 CNNM2Q9H8M5 875 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 ZNF287Q9HBT7 754 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 ZSWIM6Q9HCJ5 1215 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 TAOK2Q9UL54 1235 aa15.09■□□□□ 0.01
HDAC6-229ENST00000486665 CASTP20810 708 aaKnown RBP15.08■□□□□ 0
HDAC6-229ENST00000486665 INPP5BP32019 993 aa15.08■□□□□ 0
HDAC6-229ENST00000486665 ANTXR2P58335 489 aa15.08■□□□□ 0
HDAC6-229ENST00000486665 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0
HDAC6-229ENST00000486665 RALYLQ86SE5 291 aaKnown RBP15.08■□□□□ 0
HDAC6-229ENST00000486665 ESR2Q92731 530 aa15.08■□□□□ 0
HDAC6-229ENST00000486665 TCEANC2Q96MN5 208 aa15.08■□□□□ 0
HDAC6-229ENST00000486665 UPF3BQ9BZI7 483 aaKnown RBP15.08■□□□□ 0
HDAC6-229ENST00000486665 MANSC4A6NHS7 340 aaPredicted RBP15.07■□□□□ 0
HDAC6-229ENST00000486665 RPS6KB1P23443 525 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 PSMA5P28066 241 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 GUCY1A2P33402 732 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 CAP2P40123 477 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 PRPF38BQ5VTL8 546 aaKnown RBP15.07■□□□□ 0
HDAC6-229ENST00000486665 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 DHX32Q7L7V1 743 aaKnown RBP15.07■□□□□ 0
HDAC6-229ENST00000486665 OTOP1Q7RTM1 612 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 NEDD1Q8NHV4 660 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 ZKSCAN4Q969J2 545 aaPredicted RBP15.07■□□□□ 0
HDAC6-229ENST00000486665 CCDC17Q96LX7 622 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 PTPN18Q99952 460 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 ZKSCAN3Q9BRR0 538 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 LRRC2Q9BYS8 371 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 GPHNQ9NQX3 736 aaPredicted RBP15.07■□□□□ 0
HDAC6-229ENST00000486665 IL17RBQ9NRM6 502 aa15.07■□□□□ 0
HDAC6-229ENST00000486665 IGKV6D-41A0A0C4DH26 115 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 TSPY2A6NKD2 308 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 MPHOSPH10O00566 681 aaKnown RBP15.06■□□□□ 0
HDAC6-229ENST00000486665 PRC1O43663 620 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 PPP1R12BO60237 982 aaPredicted RBP15.06■□□□□ 0
HDAC6-229ENST00000486665 NMT2O60551 498 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 GH2P01242 217 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 TSPY3P0CV98 308 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 TSPY8P0CW00 308 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 ZBTB48P10074 688 aaPredicted RBP15.06■□□□□ 0
HDAC6-229ENST00000486665 MCM5P33992 734 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 MAP3K9P80192 1104 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 ABCB5Q2M3G0 1257 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 RUFY3Q7L099 469 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.06■□□□□ 0
HDAC6-229ENST00000486665 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 WRNIP1Q96S55 665 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.06■□□□□ 0
HDAC6-229ENST00000486665 TRIM17Q9Y577 477 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 CYP46A1Q9Y6A2 500 aa15.06■□□□□ 0
HDAC6-229ENST00000486665 POTEFA5A3E0 1075 aa15.05■□□□□ -0
HDAC6-229ENST00000486665 CTNND1O60716 968 aaKnown RBP15.05■□□□□ -0
HDAC6-229ENST00000486665 ALDH1A1P00352 501 aa15.05■□□□□ -0
HDAC6-229ENST00000486665 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
HDAC6-229ENST00000486665 CRHR2Q13324 411 aa15.05■□□□□ -0
HDAC6-229ENST00000486665 SEPT2Q15019 361 aa15.05■□□□□ -0
HDAC6-229ENST00000486665 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.05■□□□□ -0
HDAC6-229ENST00000486665 CD99L2Q8TCZ2 262 aa15.05■□□□□ -0
HDAC6-229ENST00000486665 ELP3Q9H9T3 547 aa15.05■□□□□ -0
HDAC6-229ENST00000486665 TCP11L1Q9NUJ3 509 aa15.05■□□□□ -0
HDAC6-229ENST00000486665 RBBP6Q7Z6E9 1792 aaKnown RBP15.05■□□□□ -0
HDAC6-229ENST00000486665 ZSWIM8A7E2V4 1837 aa15.05■□□□□ -0
HDAC6-229ENST00000486665 IREB2P48200 963 aaKnown RBP15.04■□□□□ -0
HDAC6-229ENST00000486665 NEK4P51957 841 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 RABEP1Q15276 862 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 CCDC84Q86UT8 332 aaPredicted RBP15.04■□□□□ -0
HDAC6-229ENST00000486665 CLEC10AQ8IUN9 316 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 SIAH1Q8IUQ4 282 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 IGDCC4Q8TDY8 1250 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 CEP95Q96GE4 821 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 TTC14Q96N46 770 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 ZSCAN10Q96SZ4 725 aaPredicted RBP15.04■□□□□ -0
HDAC6-229ENST00000486665 SENP2Q9HC62 589 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 CABP5Q9NP86 173 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 PDRG1Q9NUG6 133 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 ZBTB21Q9ULJ3 1066 aa15.04■□□□□ -0
HDAC6-229ENST00000486665 KIAA0100Q14667 2235 aaKnown RBP15.03■□□□□ -0
HDAC6-229ENST00000486665 IFIT3O14879 490 aaKnown RBP15.03■□□□□ -0
HDAC6-229ENST00000486665 NOVP48745 357 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 NT5C2P49902 561 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 INHBEP58166 350 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms