RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 TRMT1Q9NXH9 659 aaKnown RBP12.91□□□□□ -0.34
SLX4-203ENST00000486524 TNRC6CQ9HCJ0 1690 aaKnown RBP12.91□□□□□ -0.34
SLX4-203ENST00000486524 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
SLX4-203ENST00000486524 PRPF3O43395 683 aaKnown RBP12.9□□□□□ -0.34
SLX4-203ENST00000486524 GRAPQ13588 217 aa12.9□□□□□ -0.34
SLX4-203ENST00000486524 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
SLX4-203ENST00000486524 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
SLX4-203ENST00000486524 PHF20Q9BVI0 1012 aa12.9□□□□□ -0.34
SLX4-203ENST00000486524 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
SLX4-203ENST00000486524 ARPP21Q9UBL0 812 aaPredicted RBP12.9□□□□□ -0.34
SLX4-203ENST00000486524 FAM237AA0A1B0GTK4 181 aa12.9□□□□□ -0.34
SLX4-203ENST00000486524 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
SLX4-203ENST00000486524 RIOK3O14730 519 aaKnown RBP12.9□□□□□ -0.34
SLX4-203ENST00000486524 FGRP09769 529 aa12.9□□□□□ -0.34
SLX4-203ENST00000486524 VEGFAP15692 232 aaPredicted RBP12.9□□□□□ -0.34
SLX4-203ENST00000486524 ZNF174Q15697 407 aa12.9□□□□□ -0.34
SLX4-203ENST00000486524 SAP30BPQ9UHR5 308 aaKnown RBP12.9□□□□□ -0.34
SLX4-203ENST00000486524 CEP131Q9UPN4 1083 aa12.9□□□□□ -0.34
SLX4-203ENST00000486524 SERPINC1P01008 464 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 CALM1P0DP23 149 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 CALM2P0DP24 149 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 CALM3P0DP25 149 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 TNNT1P13805 278 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 FANCCQ00597 558 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 TFAP4Q01664 338 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 POSTNQ15063 836 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 PPP2R5BQ15173 497 aa12.9□□□□□ -0.35
SLX4-203ENST00000486524 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.35
SLX4-203ENST00000486524 RPGRQ92834 1020 aaKnown RBP12.9□□□□□ -0.35
SLX4-203ENST00000486524 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.35
SLX4-203ENST00000486524 RGL2O15211 777 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 ORC4O43929 436 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 DDAH1O94760 285 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 BMP6P22004 513 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 DHX58Q96C10 678 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 EPSTI1Q96J88 318 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 HSD3B7Q9H2F3 369 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 SRPRBQ9Y5M8 271 aaKnown RBP12.89□□□□□ -0.35
SLX4-203ENST00000486524 CNTNAP5Q8WYK1 1306 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 COL24A1Q17RW2 1714 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 PCP11498 1178 aaKnown RBP12.89□□□□□ -0.35
SLX4-203ENST00000486524 CCZ1BP86790 482 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
SLX4-203ENST00000486524 MYL5Q02045 173 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 BRMS1Q9HCU9 246 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 FANCLQ9NW38 375 aa12.89□□□□□ -0.35
SLX4-203ENST00000486524 NLRP5P59047 1200 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 PRR5LQ6MZQ0 368 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 MAPKAPK5Q8IW41 473 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 DPF2Q92785 391 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
SLX4-203ENST00000486524 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
SLX4-203ENST00000486524 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 USP17L3A6NCW0 530 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 USP17L4A6NCW7 530 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 UFL1O94874 794 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 CASP1P29466 404 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 AFMP43652 599 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 GPSM2P81274 684 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 MDM2Q00987 491 aaPredicted RBP12.88□□□□□ -0.35
SLX4-203ENST00000486524 CFAP100Q494V2 611 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 PIK3AP1Q6ZUJ8 805 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 USP17L1Q7RTZ2 530 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 MAN1B1Q9UKM7 699 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 XDHP47989 1333 aa12.88□□□□□ -0.35
SLX4-203ENST00000486524 IKBKBO14920 756 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 UBASH3AP57075 661 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 TRMT44Q8IYL2 757 aaKnown RBP12.87□□□□□ -0.35
SLX4-203ENST00000486524 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 WDR66Q8TBY9 1149 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
SLX4-203ENST00000486524 SMARCE1Q969G3 411 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 NEMFO60524 1076 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 LEMD3Q9Y2U8 911 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 A0A087X0B3 334 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 VWA3AA6NCI4 1184 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 GSDMDP57764 484 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 SBK1Q52WX2 424 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
SLX4-203ENST00000486524 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
SLX4-203ENST00000486524 IL17RBQ9NRM6 502 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 PRDM4Q9UKN5 801 aa12.87□□□□□ -0.35
SLX4-203ENST00000486524 AFF2P51816 1311 aa12.86□□□□□ -0.35
SLX4-203ENST00000486524 SCG2P13521 617 aa12.86□□□□□ -0.35
SLX4-203ENST00000486524 SFPQP23246 707 aaKnown RBP eCLIP12.86□□□□□ -0.35
SLX4-203ENST00000486524 PLCD1P51178 756 aa12.86□□□□□ -0.35
SLX4-203ENST00000486524 GOLGA8FQ08AF8 430 aa12.86□□□□□ -0.35
SLX4-203ENST00000486524 GOLGA8DPQ0D2H9 430 aa12.86□□□□□ -0.35
SLX4-203ENST00000486524 NPY5RQ15761 445 aa12.86□□□□□ -0.35
SLX4-203ENST00000486524 TTC38Q5R3I4 469 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms